Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00634 ATGCTGTTGCGGGTTCTTCTCTTTCACTCTCTGCTGCGTTATCCTTCGTTGAGATCAAAACCAGTGAACAAAACAAGCGTTTCTTACTGCTACTGCAATAATCTCTCTGCATCCACGTTCATGGCGTCTTCAGTAGTGGATTGCAGCACACTGGTTTTATGCGGTAAATCATTGGCAGAGATAGAAGCTGCTAAAGCTATTAAGAGCAGTAACACTCTCAAGCTCCCTGACAATGAAGAATTATCAATTGTTTTGCAATCAGAATTGGATGGTGAAAATGTTATGAGAAGGTCCTTCAATGTTGATTCTTTCATGAATTCTCTTTGCACTGATACATTTGGCAGGCTTCTTGTTTGGTCGCCGCGGTTAGCTTCTACACATGATGTAGTTTCACACAACTTTTGTGAGCTTCCTATTGGTTCAGTTTGTCTTGCTGATGTTCAGACCAAGGGGCGAGGTCGGTCAAAGAATGTCTGGGAGTCTCCCTTAGGTTGTCTCCTGTTTTCCTTTACTCTGCAAATGGAGGATGGGCGAATAGTTCCGTTGGTGCAGTATGTGGTTTCCCTTGCTATTACAGAAGCAGTGAAGGATATTTGCAACAAAAATGGATTACCCTCTGTTGACGTCAAAATCAAGTGGCCAAATGATCTTTATTTAAACGGCTTAAAAGTTGGTGGCATTCTTTGCACCTCAACCTATAAGTTGAAGAAGTTCAATGTCAGTGCAGGTATAGGCTTGAATGTCAATAACGAGAAGCCAACAACGTGCTTAAATACAAAACTTAGAGAATTGTCAGTGGAGGCTTACCGATTTCAAAGAGAAGATGTTCTGGCAACCTTTTTTAACAAATTTGAGACATTTTATCGTCTATTTATCGATCAAGGATTTCAAAGCCTGGAGGAGCTATATTATAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTACAAGAAAAGAACGACGACAATGTGGTCGAGCATGTGGTAACTATTCAGGGTTTGACATCTTCAGGATATTTATTGGCTGTTGGTGATGATAGTCAGTTGTGTGAGCTCCACCCTGATGGTAATAGCTTTGATTTTTTCAAAGGACTTGTGAGGAGGAAACTTGAGTGA 1116 0.4104 MLLRVLLFHSLLRYPSLRSKPVNKTSVSYCYCNNLSASTFMASSVVDCSTLVLCGKSLAEIEAAKAIKSSNTLKLPDNEELSIVLQSELDGENVMRRSFNVDSFMNSLCTDTFGRLLVWSPRLASTHDVVSHNFCELPIGSVCLADVQTKGRGRSKNVWESPLGCLLFSFTLQMEDGRIVPLVQYVVSLAITEAVKDICNKNGLPSVDVKIKWPNDLYLNGLKVGGILCTSTYKLKKFNVSAGIGLNVNNEKPTTCLNTKLRELSVEAYRFQREDVLATFFNKFETFYRLFIDQGFQSLEELYYKTWLHSGQRVIVQEKNDDNVVEHVVTIQGLTSSGYLLAVGDDSQLCELHPDGNSFDFFKGLVRRKLE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00634 371 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 102 292 IPR004143 GO:0036211
Adu08g00634 371 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 121 342 IPR004408 GO:0004077|GO:0036211
Adu08g00634 371 PANTHER BIOTIN PROTEIN LIGASE 67 369 - -
Adu08g00634 371 Pfam Biotin protein ligase C terminal domain 309 364 IPR003142 GO:0036211
Adu08g00634 371 Gene3D Bira Bifunctional Protein; Domain 2 105 306 IPR045864 -
Adu08g00634 371 CDD BPL 117 291 IPR004408 GO:0004077|GO:0036211
Adu08g00634 371 SUPERFAMILY Class II aaRS and biotin synthetases 104 307 IPR045864 -
Adu08g00634 371 Pfam Biotin/lipoate A/B protein ligase family 121 247 IPR004143 GO:0036211
Adu08g00634 371 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 67 369 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00634 K01942 - gmx:100818402 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00634 08 11347185 11351112 Adu08g00634 08 11347185 11351112 ECH