Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00588 ATGGATGTGAAAGGAACAAGTGGGGTTGTTCCATTGAGGAAGGTGTTGTTTCTGGTTCTAATCCTTTGTGCAATTTTCTCAGTTTCTTTGTCAAAAGTGAATGATACAAATGATCAGATTCTTAACGCCAAGAAGCCACAACCAAAACCCGCAGCTCCTTCTAGATCGTCTGGTCACACTTTTCATTTCGCCATTCAAGGGAATGTCTATCCTCTTGGATATTATACAGTGAAAGTGGCAATTGGAAATCCACCTCAATTATACGACCTTGACATTGACTCTGGTAGTGATCTCACTTGGGTTCAGTCCAAACCCTGTAAGACCTGCACACCTCGTTCACAATATTATCCGTATAACCCCAACAGTAACATCCAATGCAAAGAACCCCTTTGTGCTGCGCTAAATAGAAACTGCGCTCCACCAACTGGGCCATGTAAATATAAAATCGAGTATGCAGACAATGAATTTTGTTCAGGGGTGCTTGTTAGGGACTTTATTTCCTTTAGATTAGACGATGGCTCTGTTCTGCATCCTCAACTTGGCTTCGGGAGTGGATTTGATCAAACACCTTCTAAGCATCATCATTCCTCGCATATCAAAACGGCGGGGGGGTTTGGCCTTGGCAATGGCAAGACAAGCATTTTGTCTCAGCTTTCTTCTCTGGGCTACATTCGCAATGTCTTTGGCCATTGCTTGAGTTCCAAAGGAGGAGGTCGTTTATTCCTTGGTGATGATGATATTAAAACCTCCAAGACTCTTGTTTGGACACCTATCTTGCGCAGTTCCTCCTCCTCCAATATAGAACACTACAGGGCAGGTCCTGTAGTTTTATTGTTCAATGGGAAGCAAGCTGTTAATGGTCTTGAAGTGTGTTTTGACAGTGGAAGCACATACACATACCTCAATAAAAAAGCTTATAATGTTTTGTTTGGTCTGATAAATAATGACTTAGGAAATAAGGTGCAGAGAGCTACTGAGGATACAACACTGGCAATATGTTGGAAGGGTCAAAATCTTTTTGGATATTTCAAAAACATAGTACTGAACTTCCCAAAAACAAAATCTCAGTTCGTACTAACACCACAATCTTATCTCATTGTCTCGGAACGTCATAATACCTGCTTAGGGATTTTAGATGGCTCAATAGAAGAACTTGGAGATACTAACATAATTGGAGACGTCTCTTTTCAAGATAAGCTAGTGGTTTATGACAACGAGAAGATGCAGATTGGATGGGTTCCTGACAATTGTGCTACGTCTCCATTTACAAATGCCAAATCATTACGAGTTCATCACAGAGGAAATATTTTGTCCTAA 1317 0.4093 MDVKGTSGVVPLRKVLFLVLILCAIFSVSLSKVNDTNDQILNAKKPQPKPAAPSRSSGHTFHFAIQGNVYPLGYYTVKVAIGNPPQLYDLDIDSGSDLTWVQSKPCKTCTPRSQYYPYNPNSNIQCKEPLCAALNRNCAPPTGPCKYKIEYADNEFCSGVLVRDFISFRLDDGSVLHPQLGFGSGFDQTPSKHHHSSHIKTAGGFGLGNGKTSILSQLSSLGYIRNVFGHCLSSKGGGRLFLGDDDIKTSKTLVWTPILRSSSSSNIEHYRAGPVVLLFNGKQAVNGLEVCFDSGSTYTYLNKKAYNVLFGLINNDLGNKVQRATEDTTLAICWKGQNLFGYFKNIVLNFPKTKSQFVLTPQSYLIVSERHNTCLGILDGSIEELGDTNIIGDVSFQDKLVVYDNEKMQIGWVPDNCATSPFTNAKSLRVHHRGNILS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00588 438 Gene3D Acid Proteases 244 425 IPR021109 -
Adu08g00588 438 Pfam Xylanase inhibitor N-terminal 75 244 IPR032861 -
Adu08g00588 438 Gene3D Acid Proteases 50 243 IPR021109 -
Adu08g00588 438 Pfam Xylanase inhibitor C-terminal 289 412 IPR032799 -
Adu08g00588 438 SUPERFAMILY Acid proteases 68 418 IPR021109 -
Adu08g00588 438 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 14 419 - -
Adu08g00588 438 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 90 101 IPR001969 GO:0004190|GO:0006508
Adu08g00588 438 ProSiteProfiles Peptidase family A1 domain profile. 75 413 IPR033121 -
Adu08g00588 438 PANTHER ASPARTYL PROTEASES 14 419 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00588 Adu-Chr8 10634297 10638101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00588 55 423 Miscellaneous Gene Families AT1G44130 45.876 1.21e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00588 - - gmx:100783194 395.586