Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00583 ATGTCGTTTAGGGTTCCGATCTGCTTCCTCTTTCTTTCACTCCTACTCGCGGCTCCTCAGATCTCCGCCGATGAATCAGCATCGGAGGCCAAAGAGAAGGAGTTTGTGCTAACGTTGGATCATTCTAACTTCTCCGATACCATCAAGAAGCACGACTTCATCGTCGTCGAGTTCTACGCACCTTGGTGTGGCCACTGTAAGAAGCTTGCTCCGGAGTATGAGAAAGCTGCTTCCATATTGAGCAGTCTAGATCCTCCCGTTGTTTTGGCTAAAGTTGATGCCAATGAGGAGAAGAATAAAGAGATCGCAAACGAATATGATGTTAAGGGCTACCCAACAGTCAAGATTCTTAGAAGTGGGGGAAAGCACATTCAAGAATACAAAGGTCCCCGTGAAGCAGATGGCATTGTTGAGTATTTGAAGAAACAGAGTGGCCCTGCATCTACTGAAATTAAATCCGCTGACGATGCTGCCGCTTTCATTGGCGAAAATAAAGTTGTTGTTGTTGGGATTTTCCCTAAATTTTCTGGGGAGGAGTATGAGAACTTTATCGCATTAGCAGAGAAGCTACGTTCTGATTATGACTTTGGTCACACCCTTGAGGCCAAACACCTTCCACGGGGAGAATCATCAGTTACCGGGCCTGTTGTCAGGTTATTCAAGCCATTTGATGAGCTTTATGTTGATTTCAAGGATTTCAAAGCAGAAGCTCTAGAGAAATTTATTGAAGATTCTAGCATCCCTGTTGTGACTGTCTTCAACAATGACCCAAGCAACCATCCTTTTGTTGTCAAATTCTTTAACAGTCTTAATGCTAAGGCAATGCTGTTCATCAACGTTACCAGTGATGTTGCTGAAGCGTTGAAATCGAAATACCGTGAAGCTGCTGAACAATATAGATCACAGGGTGTGAGCTTTCTGGTGGGAGATGTTGAAGCTAGTCAAGGAGCCTTCCAGTACTTTGGACTTAAGGAAGAGGATGTACCTTTGATCATCATACAACATAACGATGGAAAGAAATTTTTCAAACCTAATGTGGAGCCAGATCAACTTACAACCTGGTTGAAGGATTACAAGGAAGGGAAAGTTGCACCATATTTGAAGTCTGAGCCTATTCCTGGAACTAATAATGAACCTGTCAAAGTGGTAGTTGCTAACAGTTTTGACGACGTCGTTTTCAAATCAGGGAAGAATGTTTTGCTGGAGTTCTATGCCCCGTGGTGTGGTCATTGCAAAAAGTTGGCTCCAATATTGGATGAAGTTGCCGTCTCATATCAAAATGATGCTGATGTTACCATTGCCAAACTGGATGCAACTGCCAACGATATCCCAAGTGAATCCTTTGATGTACAAGGTTATCCAACAGTGTACTTCAAGTCTGCAAGTGGAAAGATATCACCATATGAAGGTGACAGGACTAAGGAAGACATCATCCAATTCATTGAAAAGAACAGAGATAAACCTGGCCAAGAACAAGAACAAGCAAAAGATGAATCTGTCAAGCAAGAACAAGGAAAAGATGAGCTTTGA 1530 0.4275 MSFRVPICFLFLSLLLAAPQISADESASEAKEKEFVLTLDHSNFSDTIKKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSLDPPVVLAKVDANEEKNKEIANEYDVKGYPTVKILRSGGKHIQEYKGPREADGIVEYLKKQSGPASTEIKSADDAAAFIGENKVVVVGIFPKFSGEEYENFIALAEKLRSDYDFGHTLEAKHLPRGESSVTGPVVRLFKPFDELYVDFKDFKAEALEKFIEDSSIPVVTVFNNDPSNHPFVVKFFNSLNAKAMLFINVTSDVAEALKSKYREAAEQYRSQGVSFLVGDVEASQGAFQYFGLKEEDVPLIIIQHNDGKKFFKPNVEPDQLTTWLKDYKEGKVAPYLKSEPIPGTNNEPVKVVVANSFDDVVFKSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVTIAKLDATANDIPSESFDVQGYPTVYFKSASGKISPYEGDRTKEDIIQFIEKNRDKPGQEQEQAKDESVKQEQGKDEL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00583 509 CDD PDI_b_family 148 244 - -
Adu08g00583 509 SUPERFAMILY Thioredoxin-like 347 487 IPR036249 -
Adu08g00583 509 SUPERFAMILY Thioredoxin-like 247 377 IPR036249 -
Adu08g00583 509 PANTHER PROTEIN DISULFIDE ISOMERASE-LIKE 1-2 9 503 - -
Adu08g00583 509 Gene3D Glutaredoxin 25 143 - -
Adu08g00583 509 ProSitePatterns Thioredoxin family active site. 55 73 IPR017937 -
Adu08g00583 509 Gene3D Glutaredoxin 374 488 - -
Adu08g00583 509 Gene3D Glutaredoxin 144 248 - -
Adu08g00583 509 SUPERFAMILY Thioredoxin-like 149 248 IPR036249 -
Adu08g00583 509 TIGRFAM pdi_dom: protein disulfide-isomerase domain 384 484 IPR005788 GO:0003756
Adu08g00583 509 TIGRFAM pdi_dom: protein disulfide-isomerase domain 40 143 IPR005788 GO:0003756
Adu08g00583 509 TIGRFAM ER_PDI_fam: protein disulfide isomerase 36 509 IPR005792 GO:0003756
Adu08g00583 509 ProSitePatterns Thioredoxin family active site. 400 418 IPR017937 -
Adu08g00583 509 CDD PDI_a_family 37 140 - -
Adu08g00583 509 CDD PDI_b'_family 263 359 - -
Adu08g00583 509 Gene3D Glutaredoxin 249 373 - -
Adu08g00583 509 PRINTS Thioredoxin family signature 54 62 - -
Adu08g00583 509 PRINTS Thioredoxin family signature 62 71 - -
Adu08g00583 509 PRINTS Thioredoxin family signature 107 118 - -
Adu08g00583 509 Coils Coil 492 509 - -
Adu08g00583 509 ProSiteProfiles Thioredoxin domain profile. 12 145 IPR013766 -
Adu08g00583 509 SUPERFAMILY Thioredoxin-like 36 146 IPR036249 -
Adu08g00583 509 CDD PDI_a_PDI_a'_C 379 481 - -
Adu08g00583 509 Pfam Thioredoxin 380 483 IPR013766 -
Adu08g00583 509 Pfam Thioredoxin 36 142 IPR013766 -
Adu08g00583 509 PANTHER PROTEIN DISULFIDE ISOMERASE 9 503 - -
Adu08g00583 509 MobiDBLite consensus disorder prediction 483 509 - -
Adu08g00583 509 Pfam Thioredoxin-like domain 172 357 - -
Adu08g00583 509 ProSiteProfiles Thioredoxin domain profile. 358 486 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00583 Adu-Chr8 10498659 10502011 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00583 K09580 - gmx:100170705 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00583 08 10498659 10502011 Adu08g00583 08 10498659 10502011 ECH