Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00575 ATGAAAATTCTCACTTCTTCAACTTTATTCGTATTAATTTTTCTTTCACCAATAGTTTTATCGGCTAAACAAATTCCTTCTACAGTGTACAATAGTCTCCTATTCTCGGGCCACAAAGAGAGTGTTCCGCCATCATCTGAAGCCGCCATCAACAAGAGCAACAACGCCACACATCGCACAACAGAATCTGTAGAGGACATCGATGATGGAGAAGACTGTGAATCTTCATGGAATAAGGCATGTTCAGAAGCGGTGTTGAAGGTTGCACGTCAGCCGGAGACAGTGGATTGGCTCCGGAAGGTACGAAGAAGGATCCATCAAAATCCTGAGCTGGCTTTTGAAGAAATCGAAACAAGTCGCTTAATAAGAAAAGAACTGGATCTGATGAGAATTAGTTATCGATATCCACTGGCTAAAACAGGTGTTCGTGCGTGGATCGGCACTAATGGTCCACCTTTTGTTGCCATCAGAGCTGACATGGATGCACTTCCCATACAGGAAGCTGTGGAATGGGAATACAAATCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGATGCACATGTGGCCATGCTTATGGGTGCTGCCAAAATATTGAAAACTCGAGAACATTTGTTGAAGGGAACTGTAATTCTGATATTCCAACCAGCGGAGGAAGCTGGAAATGGTGCAAAGAGAATGATACAAGATGGTGCATTGGAGGATGTTGAGGCTATATTTGCAGTTCATGTATCCCATCAGCATCCAACCGCTATTATTGGGTCCAGGCCCGGCCCATTGCTGGCTGGCTGTGGTTTTTTTAGAGCCGTGATCACAGGGAAAAAAGCACTCGCCGGCGATCCACACCACTCGATCGATCCGGTTTTGGCCGGTTCAGCCGCTGTGATCAGCTTGCAGGGTATTGTCTCCCGCGAATCCAATCCCTTGGATTCACAGGTTGTTTCTGTGACTTCATTCAATGGAGGCAACAATCTTGATATGATACCAGACACAGTGGTTCTTGGTGGAACTTTCAGAGCTTTCTCTAACACCAGCTTTTATCAACTACTTGAAAGAATTGAGCAGGTGATTGTGGAACAAGCCGGTGTGTATAGATGCTCTGCAGAGGTTGACTTCTTTGAAAAGGAGTACACCATATATCCTCCAACAGTCAATGATGACAAAATGTATGAGCATGTGAAGAAGGTTTCCATTGATTTGCTGGGTCAAACGAATTTCAAGGTAGTTCCACCCATGATGGGTGCTGAAGATTTCTCATTCTACTCCCAGGTGGTCCCTGCAGCATTCTTCTACATAGGGATAAGGAATGAGACATTGGGGTCTACTCACACAGGACACTCCCCACATTTCATGATTGATGAAGATGTTCTACCAATAGGTGCAGCAGCACATGCCACCATTGCAGAGAGGTTCCTCATTGAGTACGGGTGA 1434 0.4533 MKILTSSTLFVLIFLSPIVLSAKQIPSTVYNSLLFSGHKESVPPSSEAAINKSNNATHRTTESVEDIDDGEDCESSWNKACSEAVLKVARQPETVDWLRKVRRRIHQNPELAFEEIETSRLIRKELDLMRISYRYPLAKTGVRAWIGTNGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLMGAAKILKTREHLLKGTVILIFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHQHPTAIIGSRPGPLLAGCGFFRAVITGKKALAGDPHHSIDPVLAGSAAVISLQGIVSRESNPLDSQVVSVTSFNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVEQAGVYRCSAEVDFFEKEYTIYPPTVNDDKMYEHVKKVSIDLLGQTNFKVVPPMMGAEDFSFYSQVVPAAFFYIGIRNETLGSTHTGHSPHFMIDEDVLPIGAAAHATIAERFLIEYG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00575 477 PANTHER PEPTIDASE M20 FAMILY MEMBER 51 476 IPR017439 GO:0016787
Adu08g00575 477 SUPERFAMILY Zn-dependent exopeptidases 93 474 - -
Adu08g00575 477 Pfam Peptidase family M20/M25/M40 155 470 IPR002933 GO:0016787
Adu08g00575 477 MobiDBLite consensus disorder prediction 42 69 - -
Adu08g00575 477 Gene3D Zn peptidases 100 466 - -
Adu08g00575 477 SUPERFAMILY Bacterial exopeptidase dimerisation domain 264 373 IPR036264 -
Adu08g00575 477 CDD M20_IAA_Hyd 98 473 IPR044757 GO:0009850|GO:0016787
Adu08g00575 477 Pfam Peptidase dimerisation domain 268 362 IPR011650 -
Adu08g00575 477 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 51 476 - -
Adu08g00575 477 Gene3D - 263 382 - -
Adu08g00575 477 TIGRFAM amidohydrolases: amidohydrolase 99 461 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00575 Adu-Chr8 10374557 10382529 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00575 K21604 - gmx:100785666 744.577