LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu08g00525	ATGGCTCTGGGAAAGAATTTTCGAGGTGAAGGGAGGAAGTCAACGAACTACTATTCGACAGTTTTTGTGGCTGTGTTTGTTGGCTTTTGCTTAGTTGGTATATGGATTGTAATGTCATTCATTGTTCCATTCCAGAACACAATTGTACAGGCACCTGAGACTGTTAATGAGGGGAAACATATAGTAAATAACAATGCTTCTACACATTTTGAAGATAGTTTAGGTGATATACCTGTAGAATCAACAAAGGTCGATAGCCAGACCCAAAAAACTGAGAGTGAAAGCCAGCCGGAAAATGAGGGTGACAGAAAAGGAGTTGAAAAAGTGTCTGAGGATTCACCTGAAGAAAACAAGCAAGAGGTTGTTAGGGATAGCTCAGGTCAGTCGAGTGAAAAAAACGATTTAGAGAAGGAATTGGATGGAAACTTAAATTCAGAATCTGAAAGTAACAAGAGCACAGATAACAATCTAGGAGCAGAAAGAAATATTGGTGAAGCCACAGATCAAGAAGAGAAGTTTGGTGAGGCCGAGGAGGATAAAACCGAGAATCATGTGCATTCGGAGACCAAACAAAGTACTGGAGAGAGTAACTTGGAAAGCCATGTAAGCAACAAAGTTTCAAAAGAAGCCTTTCTAGCTGGTACTCAGCCTGAAACATTAACTGAAGTTGCAACTGAAAATGGAACTTGGTTGACTCAAGCTGCAGAGTCACAGCATGAGAAGGAATCGCAAAAGTCTTCGGCTTCTGTGGACAACAGCAAATATGACTGGAAACTGTGTAAGACAAGTGCAGGATCAGAGTACATACCATGCCTTGACAATGTGAAAGCTATTAGGATGCTTCGAAGTATAAAACATTATGAACATCGAGAGAGGCACTGTCCTAATGAAGCACCAACTTGTCTTGTTCCTCTACCTGAGGGCTATCAAATCCCAATTAGGTGGCCTCAAAGCAGGGAAAAAATTTGGTTTAACAATGCTCCACATATTAAGCTTGTAGAAGTTAAGGGGCATCAAAATTGGGTCAAAGTTACAGGGGAATACCTCACTTTTCCTGGTGGTGGAACTCAGTTTAAAAATGGTGCTCTTCATTACATTGAGTTCATTCAGAAGTCTCTTCGTAACATTGCATGGGGGAAGAGAAGTCGAGTGATACTGGACGTCGGGTGTGGTGTAGCCAGCTTTGGAGGCTATCTGTTTGAAAAAGATGTTCTTACCATGTCCTTTGCTCCCAAAGATGTGCATGAGGCACAGGTACAGTTTGCATTGGAACGTGGAATTCCCGCCACATTAGGCGTCATGGGCACCAAAAGATTGCCTTACCCTGGTTCTGTGTTTGACCTTATCCACTGTGCACGCTGTAGAGTCCCATGGCACATAGAAGGTGGCAAGCTACTCTTAGAGCTTAATCGTGTATTGCGACCGGGAGGTTACTTTGTCTGGTCTGCTACTCCTGTGTATCAAAAGGATCCGGAAGATGTTGGAATTTGGAAAGATATGGTTGAAATTACAAAGTCAATGTGCTGGGATCTGGTGGTAATTGGAAAGGACAAATTGAATGGAGTGGCAGCAGCAATATATAGAAAACCAACTGATAATGAATGCTACAATAGGAGACCGAAGAATGATCCACCGATATGTGATGAATCTGATGATCCAAATAAAGCCTGGAATGTATCACTACAGAATTGTATGCACAAAGTGCAAGTAGGTGCCTCGGAACGTGGATCGGTTTGGCCTGAGCAATGGCCACTGAGGTTGGAGAAACCACCTTACTGGTTAAACTCTCAAGTTGGTGTTTATGGAAGAGAAGCATCAGTGGAATTCACTGCAGATTACAAGCACTGGAAGAATGTTATTTCCCACTCATATTTGAATGGAATGGGAATAAATTGGGCTTCAATAAGAAACATCATGGACATGAATGCTGCTTATGGAGGGTTTGCGGCAGCTCTAAAAAATTGGAAGGTTTGGGTAATGAATGTTGTTCCGTTTGATTTTCCAGACACACTTCCAATAATCTATGAGCGTGGATTATTCGGAATTTATCATGATTGGTGTGAATCATTCAGTACCTACCCTAGATCTTATGATCTTCTACATGCTGATTCTTTATTATCAAAACTTAAAGACAGATGCAAGATAGTAGCAGTGATTGCAGAAGTTGATAGGATGCTGAGACCAGAAGGATACTTGATTGTGAGGGACAATGTCGAAACAACAAGCGAGATAGAGAGCATAGCTAAGTCTCTACACTGGGATATTCGGTTCACCTATTCGAAAGGCGACGAGGGACTACTTTGCATTCAGAAGACATTCTGGCGTCCAACAAAGGTTGAAACTATTGCAGCAGCTATTGTCTGA	2364	0.4188	MALGKNFRGEGRKSTNYYSTVFVAVFVGFCLVGIWIVMSFIVPFQNTIVQAPETVNEGKHIVNNNASTHFEDSLGDIPVESTKVDSQTQKTESESQPENEGDRKGVEKVSEDSPEENKQEVVRDSSGQSSEKNDLEKELDGNLNSESESNKSTDNNLGAERNIGEATDQEEKFGEAEEDKTENHVHSETKQSTGESNLESHVSNKVSKEAFLAGTQPETLTEVATENGTWLTQAAESQHEKESQKSSASVDNSKYDWKLCKTSAGSEYIPCLDNVKAIRMLRSIKHYEHRERHCPNEAPTCLVPLPEGYQIPIRWPQSREKIWFNNAPHIKLVEVKGHQNWVKVTGEYLTFPGGGTQFKNGALHYIEFIQKSLRNIAWGKRSRVILDVGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPATLGVMGTKRLPYPGSVFDLIHCARCRVPWHIEGGKLLLELNRVLRPGGYFVWSATPVYQKDPEDVGIWKDMVEITKSMCWDLVVIGKDKLNGVAAAIYRKPTDNECYNRRPKNDPPICDESDDPNKAWNVSLQNCMHKVQVGASERGSVWPEQWPLRLEKPPYWLNSQVGVYGREASVEFTADYKHWKNVISHSYLNGMGINWASIRNIMDMNAAYGGFAAALKNWKVWVMNVVPFDFPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADSLLSKLKDRCKIVAVIAEVDRMLRPEGYLIVRDNVETTSEIESIAKSLHWDIRFTYSKGDEGLLCIQKTFWRPTKVETIAAAIV	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu08g00525	787	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	613	752	IPR029063	-
	Adu08g00525	787	CDD	AdoMet_MTases	385	480	-	-
	Adu08g00525	787	MobiDBLite	consensus disorder prediction	145	162	-	-
	Adu08g00525	787	MobiDBLite	consensus disorder prediction	164	189	-	-
	Adu08g00525	787	MobiDBLite	consensus disorder prediction	95	144	-	-
	Adu08g00525	787	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	3	784	IPR004159	GO:0008168
	Adu08g00525	787	Gene3D	Vaccinia Virus protein VP39	357	513	IPR029063	-
	Adu08g00525	787	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	267	769	IPR004159	GO:0008168
	Adu08g00525	787	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	290	544	IPR029063	-
	Adu08g00525	787	MobiDBLite	consensus disorder prediction	69	203	-	-
	Adu08g00525	787	MobiDBLite	consensus disorder prediction	80	94	-	-
	Adu08g00525	787	PANTHER	METHYLTRANSFERASE PMT25-RELATED	3	784	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu08g00525	Adu-Chr8	9522454	9527646	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu08g00525	-		-	gmx:100793395	1226.46