Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00490 ATGGATTTGATTAAAGCTTCGAATTTGACACCTTCACCGTTACCATTCTTCACTACAACGACCAAATTCTCTTCCCACTTTTGCACATTTCTATGTAATATTCCCAGAAAGCCCCTTACTTTGCGCGCCAAGAAGAGAACCTCAGATTCTGAGCCGCTTCTAGAACCTTCTCTCCTCCAAGAAGTATCCTTCGACGACGAAGAAGAAGATGACGAACTTCTTGACGAATTTGAATTTGAAGCTGAACTGGATGATGATGATGATGACGATGATGTTATTGTTGATGATGGTGATGATGTTGATGTCGGTGCTGGTGAGGATGAAGAAGAGGAGGAGTATGAAGATGGCGATGCCTTAGTTGGTGATGGCGGAGCAGGTGGTGGAATCTCCCTTGCTGGGACATGGTGGGATAAGAAGGCACTAGCCATTGCTAAAGAAGTTACTGCCTCTTTTGATGGTGACCTGCAAATTTATGCCTTTAAGACTTTGGTCAATTCCACCATTCTAGTGCGCATTGAAAGGCTTACCAACAAGTCTGGCTCCCCAACAATGGAAGATATTGAAGCCTTTTCTACAACCTACAGAACAAAATTGGATGAAGCAGAGATTGCCAAATTTGTTCCTGAAAATTTGAGTTTGGAGGTGTCTTCTCCAGGTGTTGAAAGAATAGTTCGGATTCCAACTGACCTGGATCGATTCAAGGACCGGCCTATGTATGTGAATTACTCCATTGTTAATGATTCTGATAATTCATCTACAGAAGGTGATGGGGTCTTCAGGCTTGAATCCTTTGACATGGAAACTAAGTGTTGCACGTGGGGTATAGCTGATGTGAGAGTCAACAGAGGGAAAGGAAGACCACTGAATAAGAAACAAAGAGAATGGCGTTTAAACACTCCCTTTGATTCATTACGTTTAGTACGGTTGCATTTTAAATTTTTGAAACTTGACAAGTTTGAGGTCTTTGTAGATTCACTGGATTGTAATTTCCCTTTTGTGGATGTCACATTTTCAACAAAACCAACTTCTTCAACCATAAACCAGAAACCACACCCACCACCTTCTGCAATCTGCATGCCATTCATGCAGATGCTGGGTTTGCTGAGTTTCTGGATTTCATTACCAAAGTTGAGAACTTTATTCTCAAAAGCTTTTGGCTTTGGCAACAAATTCATGAAGGGTAGCAGCAGCAATGTCTGGATCTTTGTTTCCATATCGCTTCTCTTGTTCCTTTCTTGGGTATACTCATTCGTGTTTCCCAGTGATCTTTCTGTGATTCAGCATTATGATGAGATAATCCCCAACACTTCTCAGTCACTGAATCACAGTGTTGAGGTTCCCAATGTTTCTCATTCAATGAACCAAAGTTTTGATTTTGAGATGCTGAAATCCAAAGTTGTTCCAATGGGGAAGTGTAATGTGTTTGAAGGAAGTTGGATCCATGATAATAGCTACCCTCTATATGATGCTTCTCAATGTCCATTTGCTGAAAGGGGTTTCAATTGCATAGCTAATGGGCGTAGGGATAGAGGTTATACAAAGTGGAGGTGGAAGCCTAAGAATTGTGATGTTCCGAGGTTCAATGCCCGGCGAATACTCGAACAGCTTCGAGGGAAAAGGGTAGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTTTGTTAATGACAGGAGTTGAGGATAAGAAGAGTATGTATGAAATCAAGGGCAATAGGATCACCAAACAGATTAGGTTTCTTGGTGTAAGGTTTAGTACTTTCGATTTGAGGATCGATTTTTATCGATCAGTGTTCCTTGTGAGGCCTGGTTCTGTGCCTAAGCATTCACCCCAAAGGATTAAGACAACATTGAGATTGGACAAGATTGATGATATTAGCCATGAGTGGATTGATTCAGATGTTCTAATATTCAATTCAGGTCATTGGTGGACAAGGACTAAGCTTTTTGACATGGGTTGGTACTTTCAGGTTGGTAACTCAGTGAAGCTTGGAATGACAATCAATTCTGCTTATAACACAGCCCTTCACACCTGGGCATCTTGGGTGGAGAATTCAGTCAACATGAATAGAACAAGAGTGTTCTTCCGTACCTTTGAATCATCTCATTGGAGTGGAAAGAACCACAATGCATGCAAAGTGAGTAGGAATCCATGGAAGAGAAGCAATGGGAAGGAGCGAAGCCCTATATCAGATATGATCAACAGGGTTGTGAAGAACATGAGTGTTCCAGTAACAGTTTTGCATGTAACACCAATGAGTTCTTATAGGAGTGATGGTCATGTAGGAACTTGGAGTGACAATCCATCTGTTCCTGATTGCAGCCATTGGTGTCTCCCTGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCTTATTTGCTTCCAAAACCTCTCTAA 2412 0.4146 MDLIKASNLTPSPLPFFTTTTKFSSHFCTFLCNIPRKPLTLRAKKRTSDSEPLLEPSLLQEVSFDDEEEDDELLDEFEFEAELDDDDDDDDVIVDDGDDVDVGAGEDEEEEEYEDGDALVGDGGAGGGISLAGTWWDKKALAIAKEVTASFDGDLQIYAFKTLVNSTILVRIERLTNKSGSPTMEDIEAFSTTYRTKLDEAEIAKFVPENLSLEVSSPGVERIVRIPTDLDRFKDRPMYVNYSIVNDSDNSSTEGDGVFRLESFDMETKCCTWGIADVRVNRGKGRPLNKKQREWRLNTPFDSLRLVRLHFKFLKLDKFEVFVDSLDCNFPFVDVTFSTKPTSSTINQKPHPPPSAICMPFMQMLGLLSFWISLPKLRTLFSKAFGFGNKFMKGSSSNVWIFVSISLLLFLSWVYSFVFPSDLSVIQHYDEIIPNTSQSLNHSVEVPNVSHSMNQSFDFEMLKSKVVPMGKCNVFEGSWIHDNSYPLYDASQCPFAERGFNCIANGRRDRGYTKWRWKPKNCDVPRFNARRILEQLRGKRVVFVGDSLSRTQWESLICLLMTGVEDKKSMYEIKGNRITKQIRFLGVRFSTFDLRIDFYRSVFLVRPGSVPKHSPQRIKTTLRLDKIDDISHEWIDSDVLIFNSGHWWTRTKLFDMGWYFQVGNSVKLGMTINSAYNTALHTWASWVENSVNMNRTRVFFRTFESSHWSGKNHNACKVSRNPWKRSNGKERSPISDMINRVVKNMSVPVTVLHVTPMSSYRSDGHVGTWSDNPSVPDCSHWCLPGVPDMWNEILFSYLLPKPL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00490 803 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 462 799 - -
Adu08g00490 803 MobiDBLite consensus disorder prediction 85 121 - -
Adu08g00490 803 Pfam PMR5 N terminal Domain 471 523 IPR025846 -
Adu08g00490 803 SUPERFAMILY YhbC-like, N-terminal domain 167 221 IPR035956 -
Adu08g00490 803 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 524 796 IPR026057 GO:0016740
Adu08g00490 803 Pfam RimP N-terminal domain 164 221 IPR028989 -
Adu08g00490 803 MobiDBLite consensus disorder prediction 45 71 - -
Adu08g00490 803 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 462 799 IPR029962 GO:0016413
Adu08g00490 803 MobiDBLite consensus disorder prediction 85 118 - -
Adu08g00490 803 Hamap Ribosome maturation factor RimP [rimP]. 138 313 IPR003728 GO:0042274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00490 Adu-Chr8 8784247 8792086 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00490 - - gmx:100784384 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00490 08 8784247 8792086 Adu08g00490 08 8784247 8792086 ECH