Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00488 ATGGGTTTGCTGGATATTCTGTGTTCTTCTGTATTTCTGTTTACACTGGTTGAGGCCACCAGCAGATCAGGGAATATCTGGCCCCTCAATGTTGGTGCTGAGTCCACGGGAACAGTAAGCTGGACAGTCTTCACTGCAAGTATATTTGTACTTGTTGCTCTTGTTCTCTCAACGTATCTGATATTTGAGCATTTAGCTGCCTATAATCAGCCTGAGGAACAGAAGTTTTTGATTGGTCTCATTTTAATGGTTCCTGTTTATTCATTGGAATCGTTTTTGTCACTATTGGATTCCAGCGCAGCATTTAACTGTGAAATTATAAGGGATTGCTACGAGGCATTTGCATTATATTGCTTTGAAAGATACTTGATTGCTAGCTTAGGTGGTGAGGACAAAACAATTGAATTTATGGAAGGTAAAAGCCCAACAGATTCCAACAGTCCTCTCCTGAAAGAAGAATATGCATATGGAGTCGTAGAGCATCCATTTCCATTAAACTGCTGTTTAAGAGATTGGTATCTTGGCCCCGACTTCTATCAGTCTGTGAAAATTGGCATTGTACAATATATGATACTAAAAATGATCTGTGCATTGCTGGCAATGATCCTCCAGGCTTTCGGGGTTTATGGAGAGGGGAAGTTTGAATGGAAATATGGGTATCCATACTTGGCAAGTATTCTTAATTTCAGTCAGACGTGGGCCCTATATTGCCTTGTACAGTTCTATACTGTCACTAAAGATAAACTGGAGCCTATCAAACCATTGGCAAAGTTTCTAACTTTCAAGTCAATTATCTTTCTGACATGGTGGCAAGGTGTGGTTGTTGCTTTTCTTTTTTCCATGGGAGCATTTAAAGGGGCACTTGCTCAAGAGCTGAAAACACGTATACAAGACTATATAATCTGTATAGAGATGGGCATTGCTGCTGTTGTGCATCTTTATGTCTTTCCTGCGACACCATACAAGAGGGGAGAGAGGTGTGTACGCAATGTAGCGGTCATGGCTGAGTATGCATCCCTAGGATCACCTCCAGATCCAGCAGAGGTCCGAGACGCCGAGCGAACACCCAGAGTGCATCTGGGTCGACAAGATGAGAAAGAGAGGCGTGTGAAGTTCACCCATAATGTTCGTGATGTGGTTGTTGGGAGCGGTGAAATTATTGTTGATGACATGAAATTCACAGTATCACATGTGGTAGAACCAGTTGAAAGGAGCATTGCAAAGATAAACAAAACCTTCCATCAGATATCAGAAAATGTGAAACGCCACGATGAGGAGCGGAGGAGAAGCACAAAGGACGACAGTTATGTCGTTCCGATGCGTTCATGGAGAACAGAGTACTCTGATGTTCATGATGGACTTGTGGAAGGAAGTGTGAGTGATAGTGGTATGCCCAGTGGGAAGAGACAACAACACTCCAAAGACTCGGCCTCCAGGATGAAAAGATAG 1449 0.4286 MGLLDILCSSVFLFTLVEATSRSGNIWPLNVGAESTGTVSWTVFTASIFVLVALVLSTYLIFEHLAAYNQPEEQKFLIGLILMVPVYSLESFLSLLDSSAAFNCEIIRDCYEAFALYCFERYLIASLGGEDKTIEFMEGKSPTDSNSPLLKEEYAYGVVEHPFPLNCCLRDWYLGPDFYQSVKIGIVQYMILKMICALLAMILQAFGVYGEGKFEWKYGYPYLASILNFSQTWALYCLVQFYTVTKDKLEPIKPLAKFLTFKSIIFLTWWQGVVVAFLFSMGAFKGALAQELKTRIQDYIICIEMGIAAVVHLYVFPATPYKRGERCVRNVAVMAEYASLGSPPDPAEVRDAERTPRVHLGRQDEKERRVKFTHNVRDVVVGSGEIIVDDMKFTVSHVVEPVERSIAKINKTFHQISENVKRHDEERRRSTKDDSYVVPMRSWRTEYSDVHDGLVEGSVSDSGMPSGKRQQHSKDSASRMKR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00488 482 Pfam Organic solute transporter Ostalpha 43 321 IPR005178 -
Adu08g00488 482 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 13 476 - -
Adu08g00488 482 MobiDBLite consensus disorder prediction 449 482 - -
Adu08g00488 482 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 13 476 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00488 Adu-Chr8 8744557 8749417 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00488 - - gmx:100804401 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00488 08 8744557 8749417 Adu08g00488 08 8744557 8749417 ECH