Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00484 ATGGCAACTTTTGAGTTAGAGAAGCTGCCTCTTACATATACTCATTCACTTTCAGATTCTTCCTCTGCCTATCAACCTTTCCCTTCTCATTCTCACTACCAAAAATATTATCACTACAATCTTGTTATCACTGATAAGGACCAATTCCGTAATTTCCTTCTTGTTTCATTAACAATCATTCTTGCCATCATAGCATTGGTTCTAATCTTGCACTTTTTACCCCATAAGAACAAGCATCAAGGAACTTCAATCAATTTCAAACTCGCAATTAACCATGCTCTAACTTTTTATGATGCACAAAAATCTGGACACTATCCGAAGAACAGCCCAGTGAAATTTCGAGGCGATTCAGGATTAGGCGATGGAAAATCAGCAGATACTGATCTTGTTGGTGGATTCTATGACTCTGGCAATAACATTAAATTTACTTTCACCACAGCTTATACTACAACCTTGTTGAGTTGGAGTGTGATGGAATATCATAGTAAATATGCTGATCTTGGTGAGCTGCAACATGTTAGGGACATAATCAGATGGGGAAGTGACTATCTCCTAAAGGTGTTCATTCTCCCAACTTCATCTAAATCTAACCTTACAATATACTCGCAGGTTGGAAATACCATTAGTGATAAGGGAGAGCCAAAAAATGATATAAGCTGCTGGCAAAGACCTGAAGACATGGATTATGCAAGACCAGTTTCAATTTGTGACAGTTCTGCTTCAGATTTAGGAGGTGAAATTGTTGCAGCATTATCTGCATCATCTATGGTATTAAAAAATGACACAGAATACTCAATGAAACTAGTCAAAGCAGCAGAAACTCTACACAAGTTAGTCACAAGTGAAGATCCAAAGAAGCAAGGAACTTACACAATGGTTGATGCATGTGGAAAACAAGCAAGAGATTTCTACAAATCATCAAGTTACAAAGATGAATTGGCATGGGGAGGAACATGGTTGTTTCTTGCTACTGGAAACTTAACTTACCTTGATTATGCTACTGAGACTTTTAAATCTGCCAAGAACAATGAATCAGATTTTGATAATGGAACCTTTGATTGGAACAACAAGCTCAATGCGCTCGCGGTTTTGCTAACAAGAATTCGATATTTTCGTGATCCTGGAGGATTGTATGAACATGCTTTGAGGCTCTCATCAAACTCAACACACTCCCTCATGTGCTCTTTGCTGTTCAATGATTTTAGCAGGACACCTGGTGGATTGATTATCATGAAAGATGATAATGGGCCATTACTAGAGTATGCTGCAACAGCATCATTCCTCAGTAAATTGTATAGTGATTATCTTCATCATCTCAAGTTCTCTGGTGCAAAATGCAAGAGTAATGTGTTTTCGGTTAACTACATATTGGGACAGAATCCTTTGAAGATGAGTTACTTAGTGGGACATGGTGACAAATTTCCAGTGCAAGTTCATCACAGAAGTGCATCAATTCCATGGGATGATAAGAAGCATTATAGTTGTGATGGTGGCAAGAAATGGCTCAACTCGAAGGATCCGAATCTGCAAGTTCTTGTTGGAGCCATGGTGGGAGGGCCAGACATGCATGATGGTTTCATAGATCAAAGGAACAATTCAAGGTTCACTGAGCCAAACATAGCAAGCAATGCTGGTTTAGTTGCAGCACTTATTGCACTTTCTGATAACTCAAGTGGCTTGAAAGATTCATTTTGA 1695 0.3864 MATFELEKLPLTYTHSLSDSSSAYQPFPSHSHYQKYYHYNLVITDKDQFRNFLLVSLTIILAIIALVLILHFLPHKNKHQGTSINFKLAINHALTFYDAQKSGHYPKNSPVKFRGDSGLGDGKSADTDLVGGFYDSGNNIKFTFTTAYTTTLLSWSVMEYHSKYADLGELQHVRDIIRWGSDYLLKVFILPTSSKSNLTIYSQVGNTISDKGEPKNDISCWQRPEDMDYARPVSICDSSASDLGGEIVAALSASSMVLKNDTEYSMKLVKAAETLHKLVTSEDPKKQGTYTMVDACGKQARDFYKSSSYKDELAWGGTWLFLATGNLTYLDYATETFKSAKNNESDFDNGTFDWNNKLNALAVLLTRIRYFRDPGGLYEHALRLSSNSTHSLMCSLLFNDFSRTPGGLIIMKDDNGPLLEYAATASFLSKLYSDYLHHLKFSGAKCKSNVFSVNYILGQNPLKMSYLVGHGDKFPVQVHHRSASIPWDDKKHYSCDGGKKWLNSKDPNLQVLVGAMVGGPDMHDGFIDQRNNSRFTEPNIASNAGLVAALIALSDNSSGLKDSF 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00484 564 Pfam Glycosyl hydrolase family 9 88 550 IPR001701 GO:0004553|GO:0005975
Adu08g00484 564 Gene3D - 82 557 IPR012341 GO:0005975
Adu08g00484 564 PANTHER ENDOGLUCANASE 26 559 - -
Adu08g00484 564 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 455 481 IPR018221 -
Adu08g00484 564 SUPERFAMILY Six-hairpin glycosidases 84 555 IPR008928 GO:0005975
Adu08g00484 564 PANTHER ENDO-1,4-BETA-GLUCANASE 26 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00484 Adu-Chr8 8706632 8709087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00484 14 554 Glycoside Hydrolase AT5G49720 42.908 2.00e-132 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00484 K01179 - gmx:100805472 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00484 08 8706632 8709087 Adu08g00484 08 8706632 8709087 ECH