Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00424 ATGGGATGCAAGTATTCAAAGAAAGTCATAAATAAAGTACCGGGTTACGAGGAACCCATTGTTCTTGCTTCTCAGACACCTTGTGAGTATCCATCATCAGCTGTTAATGTGAGTGAAGTTGAGGCCTTATATGAGCTTTACAAGAAGTTGAGCAATTCAATTATTGCAGATGGTCTTATTCACAGGGAAGAATTCCAACTTGCACTCTTCAGGAATAAAAACAAGAGAAATCTGTTTGCGGACAGGATTTTTGATCTATTTGATATCAAGAAAAATGGGGTCATTGAGTTTGGAGAATTTGTTCGATCATTGGGTGTATTTCACCCAGATGCATCTATGGAAGACAAGATTAAATTTGCTTTTAGGTTATATGATCTAAGGCAGACAGGGTATATTGAACGTGAAGAGTTGAAGGAGATGGTGTTGGCACTTCTACACGAGTCTGATCTTGTGCTTTCAGATGATATCGTGGAATCCATCGTGGATAAGACTTTTAGTGATGCTGATACAAAAGGTGATGGAAGGATTGATCAGGATGAGTGGAAAGCATTTGTGTCTAAGCATCCATCCTTGATAAAGAACATGACTCTACCATATCTAAAGTCAGTATAA 612 0.3824 MGCKYSKKVINKVPGYEEPIVLASQTPCEYPSSAVNVSEVEALYELYKKLSNSIIADGLIHREEFQLALFRNKNKRNLFADRIFDLFDIKKNGVIEFGEFVRSLGVFHPDASMEDKIKFAFRLYDLRQTGYIEREELKEMVLALLHESDLVLSDDIVESIVDKTFSDADTKGDGRIDQDEWKAFVSKHPSLIKNMTLPYLKSV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00424 203 PANTHER CALCINEURIN B-LIKE PROTEIN 4 1 201 - -
Adu08g00424 203 Pfam EF-hand domain pair 114 184 IPR002048 GO:0005509
Adu08g00424 203 SMART efh_1 116 144 IPR002048 GO:0005509
Adu08g00424 203 SMART efh_1 160 188 IPR002048 GO:0005509
Adu08g00424 203 SMART efh_1 79 107 IPR002048 GO:0005509
Adu08g00424 203 PANTHER CALCINEURIN B 1 201 IPR045198 GO:0005509|GO:0019722|GO:0019900
Adu08g00424 203 CDD EFh 116 186 IPR002048 GO:0005509
Adu08g00424 203 Gene3D - 31 203 - -
Adu08g00424 203 Pfam EF-hand domain pair 57 102 IPR002048 GO:0005509
Adu08g00424 203 ProSiteProfiles EF-hand calcium-binding domain profile. 112 147 IPR002048 GO:0005509
Adu08g00424 203 SUPERFAMILY EF-hand 35 199 IPR011992 -
Adu08g00424 203 ProSiteProfiles EF-hand calcium-binding domain profile. 75 110 IPR002048 GO:0005509
Adu08g00424 203 PRINTS Recoverin family signature 176 196 - -
Adu08g00424 203 PRINTS Recoverin family signature 130 148 - -
Adu08g00424 203 PRINTS Recoverin family signature 83 104 - -
Adu08g00424 203 ProSiteProfiles EF-hand calcium-binding domain profile. 156 191 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00424 Adu-Chr8 7482007 7486442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00424 32 203 EF-hand Containing Proteins AT5G24270 76.163 4.08e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00424 K06268 - mnt:21390233 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00424 08 7482007 7486442 Adu08g00424 08 7482007 7486442 ECH