Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00417 ATGGAGTCTCTCCAACTCACTCCTATTCATCACCATTCCTTTGTTTTTGTAAGGCACTCGCATCTCCAACTAGGTTCCCATCTCCCTTCTTCTCTGCTTACAAGAGCTTCTAGAAATGCTAACCTGCGCCTCACAAGATCCTTTTCCGGCGAGGTTGGTCCTCCTGCTTCCCATGACGAAAACAACCCCTTTCCCTTCAAAGACGAGCAACCACAAGAACAAGAAAGGGGTCTCTTGTTGGCCAGAGAGACAGATGATTTTGGCTCACTTGTTGGCTTCCGTTTGATTCCTGGCTCCGGGACCACGACAGAAGAACAACCTGAGGCTAAGGTTGGAGAAGAGTTAGAAGAGAAAGCTGAGGCTAAGGTTGGAGAAGAGTTAGAAGAGAAAGCTGAGGCGAAGGTGTCCTATAATATTACCTTTGTTACTGCTGAAGCTGCTCCATATTCAAAGACTGGTGGCCTTGGAGATGTTTGTGGTTCTTTGCCAATAGCACTGGCATCTCGTGGCCACCGTGTTATGGTCGTCTCGCCAAGATATATGCATGGTACTTCTGAGGATGCTAGGTATTCTGGTGCAGTTGACATGGATTGCAACATCAAAATATATTGCTTTGGTGCTGCTCAAGAAGTTGGCTTTTACCATGAGTATAGGAAAGGTGTTGATTGGGTATTTGTGGATCACCCTTCATTTCATAGAGCAGGGAGTCCATATGGGGACATGTATGGCACTTTTGGGGACAATCAGTTTCGGTACACTTTACTTTGCCATGCTGCATGTGAAGCCCCATTGGTGCTTCCATTGGGAGGGTACACTTATGGAGAAAGATGTTTATTCCTAGTTAATGATTGGCATGCCAGCCTTGTTCCAGTACTTTTGGCAGCAAAGTATCGTCCACATGGGGTATATAAGGATGCACGCAGTGTATTAGTTATACATAACATTGCACACCAGGGAGTGGAACCTATAGTTACATATGGTAACTTGGGGCTACCTTTGGAGTGGCGTGGAGCACTGGAGTGGGTGTTCCCCAATTGGGCAAGGATGCATGCTCTCGACACTGGTGAAGCTGTCAATTTTTTGAAAGGTGCCATTGTTACAGCAGATCGGATAGTTACAGTAAGCAAGGGTTATTCCTGGGAAATCACAACTAGTGAAGGTGGATATGGTCTACATGAGCTACTGAAAGATCGAAAAAGTGTTCTCAGTGGGATCACAAATGGAATTGATGTTACTGAATGGGACCCTTCATCTGATCAATATATTCCTTTCAAATATTCTGCTGATGACCTCTCTGGGAAGGTCAAATGCAAGATAGAATTGCAGAAGGAATTGGGTCTCCCAGAGAGACCCGATTGCCCAGTGATTGGATTCATTGGAAGGCTAGACTATCAAAAAGGAATTGAGCTGATTCGCATGGGAATTGCAGAACTCATGGAAGATGATGTTCAGTTTGTAATGCTTGGGTCTGGAAATCCTGCATACGAAGATTGGATGAGAGCAACAGAGGCTACTTATAGAGATAAATTTCGGGGTTGGGTTGGATTTAATGTTCCAATATCTCATAGAATAACTGCAGGGTGTGATATACTATTGATGCCATCGACATTCGAGCCTTGCGGACTAAATCAGTTGTATGCAATGAGATATGGAACTATACCAGTGGTTCATCAAACCGGGGGGCTGAGAGACACTGTTCAAAATTTTAACCCATTTGCTGAAGTGAAAAATGATGAAGGCACAGGGTGGACGTTTTCTCCACTAACAAAGGAGAACATGTTAGTGGCTCTGAGGTATGCCATACAAACATACAGAGAATACAAGTCTTCTTGGGAGGGATTGATGAGAAGAGGAATGACAAGAGACTATACATGGGTAAATGCTGCTACTCAGTATGAACAAATCATAGAATGGGCATTTATGGATCCACCCTATTGCTGA 1941 0.4431 MESLQLTPIHHHSFVFVRHSHLQLGSHLPSSLLTRASRNANLRLTRSFSGEVGPPASHDENNPFPFKDEQPQEQERGLLLARETDDFGSLVGFRLIPGSGTTTEEQPEAKVGEELEEKAEAKVGEELEEKAEAKVSYNITFVTAEAAPYSKTGGLGDVCGSLPIALASRGHRVMVVSPRYMHGTSEDARYSGAVDMDCNIKIYCFGAAQEVGFYHEYRKGVDWVFVDHPSFHRAGSPYGDMYGTFGDNQFRYTLLCHAACEAPLVLPLGGYTYGERCLFLVNDWHASLVPVLLAAKYRPHGVYKDARSVLVIHNIAHQGVEPIVTYGNLGLPLEWRGALEWVFPNWARMHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTSEGGYGLHELLKDRKSVLSGITNGIDVTEWDPSSDQYIPFKYSADDLSGKVKCKIELQKELGLPERPDCPVIGFIGRLDYQKGIELIRMGIAELMEDDVQFVMLGSGNPAYEDWMRATEATYRDKFRGWVGFNVPISHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHQTGGLRDTVQNFNPFAEVKNDEGTGWTFSPLTKENMLVALRYAIQTYREYKSSWEGLMRRGMTRDYTWVNAATQYEQIIEWAFMDPPYC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00417 646 Pfam Glycosyl transferases group 1 451 602 IPR001296 GO:0016757
Adu08g00417 646 Gene3D Glycogen Phosphorylase B; 157 635 - -
Adu08g00417 646 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 68 646 - -
Adu08g00417 646 CDD GT5_Glycogen_synthase_DULL1-like 138 638 - -
Adu08g00417 646 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 138 636 IPR011835 GO:0004373
Adu08g00417 646 Hamap Glycogen synthase [glgA]. 137 639 IPR011835 GO:0004373
Adu08g00417 646 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 68 646 - -
Adu08g00417 646 Gene3D Glycogen Phosphorylase B; 411 622 - -
Adu08g00417 646 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 136 640 - -
Adu08g00417 646 MobiDBLite consensus disorder prediction 47 73 - -
Adu08g00417 646 Pfam Starch synthase catalytic domain 138 396 IPR013534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00417 Adu-Chr8 7401963 7407363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00417 138 636 Glycosyltransferase AT3G01180 51.186 1.33e-167 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00417 K00703 - gmx:100807354 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00417 08 7401963 7407363 Adu08g00417 08 7401963 7407363 ECH