Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00344 ATGAAATTCTTGCATGATAATCAGACATTTGAACTTGTGAAGTTGCCAAAAGAGAAGAAAGCTTTGCAGAACAGGTGGATTTATAGGTTGAAGCATGAAGAAACTTCTCAGTCTTCAAGGATTGACATGTTGAAGAAGCAACTTGCAATGTCATTTTTCATGAAGGACCTTGGATCGGCAAAAGAGATTATTGGACCCTCTAGATGTAAAGTCATCCAAGAAATTCCCGTTAGCTTCAAGCTCGTAGACGTCAAAATCTTCAAACAGCAATGTCCTCCTCCTCCTGTGGAACAATGGGAACTTCCCTACTTGAATTATCCAGACCCACAAACCTTCAACAGATCTGGGAGCGGTTGGTTTGAGACACTTTTGAACAGTCATATGAATGTTAGCTCCAATGGAGAAATATTTTCGGTTGTTAAAAGAAGGGAGAATGTCTCTTCAATTTTAATGACATTGGATAAAGTGTATAATCTTGACTGGTTCACAAGTGCTTCAAAGATTGAATGCTCTGCCGCTGTTGGCTTCAAATGGATGCTTAATCAGGGGTTGACAAGGCATCATGAAGAAATAGTAAAATATTTTGAAAGGAGAAATGTATCTGTAATATTTCTATTCAGAAGAAATTTGCTTCGCAGAATGGTATCTGTGTTGGCAAATATTTATGACAAGGAGGTCAAGTTACTGAACGGAACACACAAGTCTCACGTGCATTCCACTACAGAGGCGAATATTCTTGCACAGTATAGGCCACGACTCAATGTTACGCTAATGATATCAGAGCTAAAGCTAACTGAGGAGACAACTCAAAATGCCTTGGTATACTTCAAGAACATTCGCCACATTGTTCTCTACTATGAGGATCTTCTCAACAATCGAACTAAAATCTTGGATGTTCAAGAATTTTTAAGGGTGCCGTACAGAGATCTACAGAGCCATCAAGTGAGGATACACACTGCTCCACTATCAATGCAGATTGAAAACTGGGAAGAAGTGCAAAAAGCACTGAATGGAACGCCGCCAACCATTCTCGAACCGTCGTCGATCTCCCACTTGTCGGACACCAGCCTCGCGGCCAAGCTTCTTCATCCGTCGCTAGTTCGGCCAGAACCCCCAACGGCCTCGTTGTCTTCCTCACCGCACACCAAGGTCGCCACACAGCTTTGTAGTGCTGTCGCTGGTTCCCCTGAAATTTCCCAAATAGGGGAACTCTCCACCCTCATCGCTGCATCGTAA 1236 0.4264 MKFLHDNQTFELVKLPKEKKALQNRWIYRLKHEETSQSSRIDMLKKQLAMSFFMKDLGSAKEIIGPSRCKVIQEIPVSFKLVDVKIFKQQCPPPPVEQWELPYLNYPDPQTFNRSGSGWFETLLNSHMNVSSNGEIFSVVKRRENVSSILMTLDKVYNLDWFTSASKIECSAAVGFKWMLNQGLTRHHEEIVKYFERRNVSVIFLFRRNLLRRMVSVLANIYDKEVKLLNGTHKSHVHSTTEANILAQYRPRLNVTLMISELKLTEETTQNALVYFKNIRHIVLYYEDLLNNRTKILDVQEFLRVPYRDLQSHQVRIHTAPLSMQIENWEEVQKALNGTPPTILEPSSISHLSDTSLAAKLLHPSLVRPEPPTASLSSSPHTKVATQLCSAVAGSPEISQIGELSTLIAAS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00344 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 316 IPR027417 -
Adu08g00344 411 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 76 340 - -
Adu08g00344 411 Gene3D - 111 335 IPR027417 -
Adu08g00344 411 PANTHER SULFOTRANSFERASE 76 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00344 Adu-Chr8 6079145 6086384 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00344 - - ahf:112704926 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00344 08 6079145 6086384 Adu05g00687 05 8049697 8052731 ECH
Adu08g00344 08 6079145 6086384 Adu01g00003 01 117514 133388 ECH
Adu08g00344 08 6079145 6086384 Adu08g00344 08 6079145 6086384 ECH