Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00278 ATGAGTTTCTTCAGTACCATTTTTGGGTTTTTCGGTTTCGGAATTGGAATTTCATTTGGCCTCGTCGCCGGCTATTTTCTCTTCATTTACTCTGAATCCGCCGATGTTAAGGATCCTGAGATCCAACCACTAGCGAATCAAGACTCAGAAACTCTCCAACGAATAATTCCTGAGATTCCACTTTGGATTAAAAATCCAGACTTCGATCGGGTTGACTGGCTTAACAGGCTTATCGAATACATGTGGCCCTATCTTGACAAGGCAATATGCAAGACCGCAGAGGGCATTGTGAAACCCATGATTGCAGAGCAGATTCCCAACTATAAAATTGATTCTGTAGAGTTTGAAGTGCTCACTCTCGGCAGCCTGCCCCCTACTTTTCAAGGGATGAAAGTTTATATAACTGATGAGAAGGAGTTAATTATGGAACCAAGTATCAAATGGGCTGGAAATCCTAATGTCACCGTCGCAGTTAAGGCATTTGGCTTGAAACCAACCATTCAAGTGGTGGATTTGCAAGTTTTTCTTGCACCTCGTGTCACTTTGAAACCTTTGGTTCCAAGCTTTCCTTGTTTTGCCAACATCTTTGTGTCTCTCATGGAAAAGCCACATGTTGACTTCGGACTAAAGCTTGTAGGGATTGATCTTATGTCTATTCCTGGTCTCTACAGGTTTGTTCAGGAGCTTATCAAAGATCAGGTTGCGAATATGTATTTATGGCCCAAAACCCTCGACGTTCAAATCATGGATCCGGCAAAAGCAATGAGGAGGGCTATTGGAATTTTAGTTGTAAAAGTAGTGAGAGCAATGAAGCTAAAGAAGAAAGATCTTCTTGGTGCATCTGACCCTTATGTGAAGATAAAGCTTTCTGGGGACAATATGCCAGCGAAAAAGACAACGGTGAAGCACAAGAACTTGAACCCAGAATGGAATGAAGAATTTAATTTGCTAGTGAAGGATCCAGAAACACAGACACTAGAGTTTGAAGTGTATGACTGGGAGCAGGTCGGGAGGCATGATTTTATGGGTACGAATGTGGTGGCTCTGAAAGAGTTGAAAGAGGAAGAAACAAAGGTTGTAACACTGGATCTGCTGAAGAACATGGATTCGAATGATGCGGCAAATGACAAGTCCCGAGGTCAGATAGTTATGGAATTAACATATAAGGCTTTCAAGGAGGAAGAGATGGGGAAAGGGTTTGAAGAGACAGAGATGATGATGATGGATAAAGCTCCAGAAGGGACTCCTCCAGGTGGAGGATTGCTTGTAGTTGTAGTCCATGAGGCACAAGACGTGGAAGGAAAGTACCACACGAATCCACAAGTACGCCTCATTTTCAGGGGAGAGGAGAGGAAAACCAAACACGTGAAGAAGAACAGAGACCCACGGTGGGAAGAGGAGTTCCAGTTTGTGGTGGAGGAGCCTCCCACTAACGACAAATTACATGTGGAGGTTGTTAGCACTTCTTCCCGTAATTTGCTTCGTCAGAAGGAGTCTCTCGGTTACGCTGACATCTCTCTTGCTGATGTTGTTACTAACAAGAGAATCAATGAGAGATATCATCTCATAGATTCCAAGAATGGTCGCCTTCAGATTGAGCTCATGTGGAGACCTTCTCAGCCCGCCACTTGA 1632 0.4375 MSFFSTIFGFFGFGIGISFGLVAGYFLFIYSESADVKDPEIQPLANQDSETLQRIIPEIPLWIKNPDFDRVDWLNRLIEYMWPYLDKAICKTAEGIVKPMIAEQIPNYKIDSVEFEVLTLGSLPPTFQGMKVYITDEKELIMEPSIKWAGNPNVTVAVKAFGLKPTIQVVDLQVFLAPRVTLKPLVPSFPCFANIFVSLMEKPHVDFGLKLVGIDLMSIPGLYRFVQELIKDQVANMYLWPKTLDVQIMDPAKAMRRAIGILVVKVVRAMKLKKKDLLGASDPYVKIKLSGDNMPAKKTTVKHKNLNPEWNEEFNLLVKDPETQTLEFEVYDWEQVGRHDFMGTNVVALKELKEEETKVVTLDLLKNMDSNDAANDKSRGQIVMELTYKAFKEEEMGKGFEETEMMMMDKAPEGTPPGGGLLVVVVHEAQDVEGKYHTNPQVRLIFRGEERKTKHVKKNRDPRWEEEFQFVVEEPPTNDKLHVEVVSTSSRNLLRQKESLGYADISLADVVTNKRINERYHLIDSKNGRLQIELMWRPSQPAT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00278 543 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 257 391 IPR035892 -
Adu08g00278 543 CDD C2 262 364 - -
Adu08g00278 543 Gene3D C2 domain 255 413 IPR035892 -
Adu08g00278 543 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 249 IPR031468 GO:0008289
Adu08g00278 543 SMART C2_3c 421 519 IPR000008 -
Adu08g00278 543 SMART C2_3c 261 361 IPR000008 -
Adu08g00278 543 Gene3D C2 domain 421 539 IPR035892 -
Adu08g00278 543 Pfam C2 domain 421 522 IPR000008 -
Adu08g00278 543 Pfam C2 domain 260 358 IPR000008 -
Adu08g00278 543 PRINTS C2 domain signature 277 289 IPR000008 -
Adu08g00278 543 PRINTS C2 domain signature 304 317 IPR000008 -
Adu08g00278 543 PRINTS C2 domain signature 326 334 IPR000008 -
Adu08g00278 543 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 537 IPR045050 GO:0008289
Adu08g00278 543 ProSiteProfiles C2 domain profile. 402 520 IPR000008 -
Adu08g00278 543 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 67 247 IPR039010 -
Adu08g00278 543 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 420 538 IPR035892 -
Adu08g00278 543 ProSiteProfiles C2 domain profile. 240 362 IPR000008 -
Adu08g00278 543 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED 1 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00278 Adu-Chr8 4854108 4856749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00278 261 518 Lipid Metabolism Gene Families AT3G61300 26.937 3.68e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00278 - - gmx:100803978 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00278 08 4854108 4856749 Adu08g00278 08 4854108 4856749 ECH