Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00247 ATGGGCAGCTACCACCCTCCACTTTCAATAGAGCCAGTGGTGTTGCTGCTTTTGACGCTGCTCATGGTTCCAGTTTCAGTTACGGGAGTGGGCATCAACTATGGCACGCTGGGTAACAACCTTCCATCACCAAAGAAAGTAGCACAGCTTCTTCAGTCAACACTCATCGACAAGGTTAAGATCTATGACTCTAACCCTGAAATCCTCCAAGCTTTCTCCAACACCGCCATTGACCTCATTGTCTCCCTCGAGAACTCCCGCGTAGCCAACATCAGCTCTGACATCTCCGCTGCACACTCTTGGCTCTCCACCCGCATCCTCCCCTTCCTGCCCGCCACCTCCGTCGTCGCCATCGCCGTCGGCAACGAGTACCTCACCACCACCGTTGACAACAACGACGACCACCTCGACGCCAACGCATTGTTCAAAGCCATGCAGAATCTCCACTCCGTACTCGCCTCCCACGGCCTCGACCGCAAAATTAAGGTGACAACGCCGCACAGCATGGCGGTTCTCGCTTCTTCCTTCCCTCCTTCCTCCGCCACCTTCGCCATGAACCTCGTTCCAGTAATGACCGACATTGTTACCTTCTTAGCCGATACCGGTGCTCCCTTCATGATCAACGCTTACCCTTACTTCGCTTACAGAGACAACCCTACCTCCGTGAACCTCGACTACGCTCTTCTCGGTAACGCTTCCGGGGTTCACGATCCAAAAGGCTACGTCTACAGCAACATGCTGGACGCGCAGATGGATGCTGTGAGATCCGCCATTGATGCTCTAGGGTTTGGAAACAGAAGCTTGGAAATAACGGTTTCAGAGTCAGGTTGGCCTTCGAAGGGTGACAACGCTGCTACTCCTCAGAACGCGAAGATCTACAACACGAGGTTGATAGAACGCGCGCAGAGTAACAAAGGAACACCGATGAAGCCTAAGGACCGAATCGAGATCTTCGTGTTCGCACTGTTCAACGAGAACAAGAAGGAAGGTGACGAGAGTGACAGAAACTTCGGGATTTTCAACGGGGATGGATCTAAAGTGTATGAGGTTGATTTGAGTTGTGAGTTTTGCAGCGGAACGACGTCGTTTGGGTTCAGCGAGAAAAATGGTTTAAGTGGTGGTGGTGGTGTCAGGGGTCCTTCGGTTTGGTGTGTTGCGAAGCCTCATGCGGATGATAAAGTTCTTCAGAGCGTTTTGGACTTTTGCTGTGGGCCCGGCGGTGTTTATTGTAGAGAGGTTTATGAAGGTGGTAACTGCTTTCAGCCAAACAAGCTTCTTGCTCACGCCTCCTTTGCTATGAATGCTTATTACCAGATGCATGGTAGAAACTACTGGAATTGCGACTTCAAGGGCACTGGCCTTGTTACCTTCAGCGACCCTAGTTATGGTGAGTGCCGGTATCCTCAACAGTAA 1413 0.5166 MGSYHPPLSIEPVVLLLLTLLMVPVSVTGVGINYGTLGNNLPSPKKVAQLLQSTLIDKVKIYDSNPEILQAFSNTAIDLIVSLENSRVANISSDISAAHSWLSTRILPFLPATSVVAIAVGNEYLTTTVDNNDDHLDANALFKAMQNLHSVLASHGLDRKIKVTTPHSMAVLASSFPPSSATFAMNLVPVMTDIVTFLADTGAPFMINAYPYFAYRDNPTSVNLDYALLGNASGVHDPKGYVYSNMLDAQMDAVRSAIDALGFGNRSLEITVSESGWPSKGDNAATPQNAKIYNTRLIERAQSNKGTPMKPKDRIEIFVFALFNENKKEGDESDRNFGIFNGDGSKVYEVDLSCEFCSGTTSFGFSEKNGLSGGGGVRGPSVWCVAKPHADDKVLQSVLDFCCGPGGVYCREVYEGGNCFQPNKLLAHASFAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGECRYPQQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00247 470 Gene3D - 379 467 - -
Adu08g00247 470 Gene3D Glycosidases 29 358 - -
Adu08g00247 470 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 464 IPR044965 GO:0004553|GO:0005975
Adu08g00247 470 SMART X8_cls 382 467 IPR012946 -
Adu08g00247 470 Pfam X8 domain 383 453 IPR012946 -
Adu08g00247 470 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 12-LIKE 13 464 - -
Adu08g00247 470 SUPERFAMILY (Trans)glycosidases 30 350 IPR017853 -
Adu08g00247 470 Pfam Glycosyl hydrolases family 17 30 351 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00247 Adu-Chr8 4172632 4174592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00247 30 468 Glycoside Hydrolase AT4G26830 39.865 1.76e-114 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00247 - - aip:107609608 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00247 08 4172632 4174592 Adu08g00247 08 4172632 4174592 ECH