Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00125 ATGGCCGGAGAGAATAGCAAGAACGACGTCGCAGTGTATCCTCCCAAAACAAGACGGTTGTGGCCTTCTCTTCTCCGTTGGATTCCGACTTCAACGGAACACATCATCGCTGCCGAGAAGCGACTCCTTTCTCTCGTCAAGACTCCCTTTGTTCAAGAACATGTTAATATTGGCTCTGGTCCTCCTGGCTCTAAAGTTAGATGGTTCCGTTCATCAAGCGACGAGCCACGGTTTCTTAACACTATTACGTTTGATAGTAAAGATGACTCCCCTACGCTTGTAATGGTCCATGGATATGCAGCTTCCCAGGGTTTCTTTTTTCGCAATTTCGATGCTCTTGCAAATCATTTCAGAGTCATTGCTGTTGATCAACTTGGCTGGGGTGGATCAAGCAGACCTGATTTTACATGTAGGAGCACTGAAGAAACTGAGACATGGTTCATAGATTCTTTTGAAGAATGGAGGAAAGCCAAAAATCTGAGCAATTTTATACTGCTTGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCACTCAAGCACCCTGAGCATGTAAAGCAATTGATTCTGGTGGGACCCGCTGGATTTACATCAGAATCAGATCCAAAGGCTGAGTTCATTATGAAGTTTCGAGCAACGTGGAAAGGAGCAGTTATGAACCATCTATGGGAATCTAATTTTACGCCTCTAAAAATTGTCAGAGGTTTAGGTCCTTGGGGTCCTAATATGGTCCGTCGATATACAGATATGAGGTTTGGTACGCGCGCACAAGGGGAAATACTGACTGAAGAGGAATCAAGATTGCTCACAGATTATATGTACCATGTATCAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTACATTTTTAAATTTGGTGCATTTCCTAGGATCCCCCTCTTTCACAGTGCCTCAGAGTGGAAAGTACCCACCACATTCATATATGGTTTTGACGACTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAGGATATGAAGGTTCCATGTGAAATCATTAGGGTCCCCCAGGTATAA 1044 0.4435 MAGENSKNDVAVYPPKTRRLWPSLLRWIPTSTEHIIAAEKRLLSLVKTPFVQEHVNIGSGPPGSKVRWFRSSSDEPRFLNTITFDSKDDSPTLVMVHGYAASQGFFFRNFDALANHFRVIAVDQLGWGGSSRPDFTCRSTEETETWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVKQLILVGPAGFTSESDPKAEFIMKFRATWKGAVMNHLWESNFTPLKIVRGLGPWGPNMVRRYTDMRFGTRAQGEILTEEESRLLTDYMYHVSAAKASGELCLKYIFKFGAFPRIPLFHSASEWKVPTTFIYGFDDWMNYEGAQEARKDMKVPCEIIRVPQV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00125 347 Pfam alpha/beta hydrolase fold 91 213 IPR000073 -
Adu08g00125 347 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 14 346 - -
Adu08g00125 347 PRINTS Alpha/beta hydrolase fold signature 116 131 IPR000073 -
Adu08g00125 347 PRINTS Alpha/beta hydrolase fold signature 179 192 IPR000073 -
Adu08g00125 347 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Adu08g00125 347 SUPERFAMILY alpha/beta-Hydrolases 82 340 IPR029058 -
Adu08g00125 347 Gene3D alpha/beta hydrolase 78 347 IPR029058 -
Adu08g00125 347 PRINTS Epoxide hydrolase signature 165 178 IPR000639 GO:0003824
Adu08g00125 347 PRINTS Epoxide hydrolase signature 179 192 IPR000639 GO:0003824
Adu08g00125 347 PRINTS Epoxide hydrolase signature 116 131 IPR000639 GO:0003824
Adu08g00125 347 PRINTS Epoxide hydrolase signature 311 327 IPR000639 GO:0003824
Adu08g00125 347 PANTHER RE40534P-RELATED 14 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00125 Adu-Chr8 1872277 1875707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu08g00125 71 198 Acyl Lipid Metabolism Gene Families AT1G64670 30.657 4.56e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00125 - - nnu:104607503 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00125 08 1872277 1875707 Adu08g00125 08 1872277 1875707 ECH