Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00107 ATGGACCTCGATCCTCGTCAATACGAAAACATTGCTATAAATGATGATGACATCCATAGTATTATTCTGTCATATCTTATACACAATTGCTACAAAGAATCAGTGGAGTCATTCATTGCTTGCACTGGGATGAAGCAGCCAGCAAATTATATGGAAAACATGGAGAAAAGAAAAAGAATCTTTCACTTTGCACTAGAAGGAAATGCACTTAAGGCTATTGAGCTTACTGACCAGATGGCACAGGAAATTTTACAAAATAATAAGGATTTACACTTTGATCTTCTAAGCCTTCATTTTGTGGAGCTCATATGCTCTAGAAAATGCTCAGAAGCCTTGGAGTTTGCACAGACCAAGTTGAGCCCTTTCGGAAAGGAGAAAAAATATATGGAAAAGCTTGAAGACCTCATGGCTCTTCTTGCTTACAAGGACCCAGAGAAGTCCCCAATGTTTCATCTTCTTAGCTTAGAGTATCGACAGCAGGTCCCCCCCCCCCTTTTTTTTCTCTTTCTCCAACACTTGAACCTTCCCAGCTACACAGCAATGGAAAGGCTAATACAACAAACTACGGTGGTCAGGCAATGCTTAAATCAAGAGGCTGGCAAG 603 0.4063 MDLDPRQYENIAINDDDIHSIILSYLIHNCYKESVESFIACTGMKQPANYMENMEKRKRIFHFALEGNALKAIELTDQMAQEILQNNKDLHFDLLSLHFVELICSRKCSEALEFAQTKLSPFGKEKKYMEKLEDLMALLAYKDPEKSPMFHLLSLEYRQQVPPPLFFLFLQHLNLPSYTAMERLIQQTTVVRQCLNQEAGK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00107 201 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Adu08g00107 201 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Adu08g00107 201 SMART toby_final6 106 201 IPR013144 -
Adu08g00107 201 SMART ctlh 53 110 IPR006595 -
Adu08g00107 201 PANTHER RAN BINDING PROTEIN 9-RELATED 8 201 - -
Adu08g00107 201 Pfam CTLH/CRA C-terminal to LisH motif domain 54 191 IPR024964 -
Adu08g00107 201 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 201 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00107 K23338 - gmx:100801338 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00107 08 1428022 1429765 Adu08g00107 08 1428022 1429765 ECH