Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00106 ATGCCTATGGTCCTTTTGCCCCTATTTTTTCGTGAAACCATGGCTTCGCACATCTTCTCCCTTCTTCTTATGTTCTTCTTCGTCACTCTCGTCTCTGCTTCTTCCCCCGACACTTCCCAACTATTCCGGAGCTGGTGTGACCACCACGGCAAGACATACTCCTCCGACGAAGAGAGAAGCTACCGCCTCAAGGTTTTCCTGGACAACTATGACTATGTCCAGCGTCACAACCAGATGGCTAATTCCCCTTATACCCTCTCCCTCAACGCCTTCGCCGATCTTACCCACCAAGAACTCAAGGCCTCTCATCTTGGCGCTCTTTCCTCTTCCTTCCTCAGATTCAAGAATCGTCAAGATCACCAGCCCCGCTATCACAATGACAATGACAATAATATCCTCCGTCAGGTTCCTTCTTCAATTGATTGGAGAAATGAAGGGGCGGTTACTCCCGTCAAAAACCAAGGAAGCTGCGGGGCTTGTTGGGCGTTCTCTGCAACAGGAGCTATTGAAGGTATAAATAAGATTGTGACAGGGACCCTTGAAAGCCTTTCTGAACAAGAACTGGTTGATTGTGATAAAAAATACAACAGCGGCTGTGAAGGTGGTCTCATGGACTATGCTTATCAATTTGTGATTGATAACCACGGAATCGACACTGAGAGCGATTATCCATTCCTTGCTCATGATGCCGCTTGCAACAAGAACAAGATGAAGAGGCGTGTTGTTACAATTGATGGTTATACTGATGTGCTCCCAAGTAATGAGAAGAAGCTCCTAGAGGCTGTTGCAACCCAGCCTGTAAGTGTAGGCATATGTGGCAGTGCTAGGGCTTTTCAGTTATACTCTCAGGGTATCTTCACCGGACCATGTTCAACTGCTTTGGATCATGCAGTGTTGATTGTAGGGTATGGTTCAGAGAACGGAGTAGATTATTGGATTGTTAAGAACTCGTGGGGAACATCATGGGGAATGAATGGTTACATACACATGGTGCGAAACAACGGTTCTCAAGGGATATGCGGCATCAACATGCTAGCTTCGTATCCAACTAAGACGACGCCTAATCCTCCTCCTCCGCCACCACCAGGTCCTACAAAATGTAATCTGTTTACTTACTGTCCAGCAGCGGAAACCTGTTGCTGCTCATGGCGTGTTCTTGGGTTGTGCTTATCATACAAATGCTGTGGGTTAGACTCTGCTGTGTGCTGTAAGGACAATAGCCATTGTTGCCCTCAGGATTATCCTATTTGTGATATAAGAAACGCTCAATGTCTTAAGAGAGTTTCGAATGGGACAACAACGATGGCATATGAGAACAAAGACTCTATCCGTAGGTCAAGAGGTTGGAGCTCTGGTTAA 1359 0.465 MPMVLLPLFFRETMASHIFSLLLMFFFVTLVSASSPDTSQLFRSWCDHHGKTYSSDEERSYRLKVFLDNYDYVQRHNQMANSPYTLSLNAFADLTHQELKASHLGALSSSFLRFKNRQDHQPRYHNDNDNNILRQVPSSIDWRNEGAVTPVKNQGSCGACWAFSATGAIEGINKIVTGTLESLSEQELVDCDKKYNSGCEGGLMDYAYQFVIDNHGIDTESDYPFLAHDAACNKNKMKRRVVTIDGYTDVLPSNEKKLLEAVATQPVSVGICGSARAFQLYSQGIFTGPCSTALDHAVLIVGYGSENGVDYWIVKNSWGTSWGMNGYIHMVRNNGSQGICGINMLASYPTKTTPNPPPPPPPGPTKCNLFTYCPAAETCCCSWRVLGLCLSYKCCGLDSAVCCKDNSHCCPQDYPICDIRNAQCLKRVSNGTTTMAYENKDSIRRSRGWSSG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00106 452 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Adu08g00106 452 PRINTS Papain cysteine protease (C1) family signature 296 306 IPR000668 GO:0006508|GO:0008234
Adu08g00106 452 PRINTS Papain cysteine protease (C1) family signature 311 317 IPR000668 GO:0006508|GO:0008234
Adu08g00106 452 SUPERFAMILY Cysteine proteinases 37 350 IPR038765 -
Adu08g00106 452 Gene3D Cysteine proteinases 28 352 - -
Adu08g00106 452 Pfam Papain family cysteine protease 136 349 IPR000668 GO:0006508|GO:0008234
Adu08g00106 452 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 311 330 IPR025661 -
Adu08g00106 452 Gene3D Granulin 365 434 IPR037277 -
Adu08g00106 452 SMART pept_c1 136 350 IPR000668 GO:0006508|GO:0008234
Adu08g00106 452 SMART GRAN_2 367 424 IPR000118 -
Adu08g00106 452 CDD Peptidase_C1A 137 348 IPR039417 -
Adu08g00106 452 Pfam Cathepsin propeptide inhibitor domain (I29) 42 98 IPR013201 -
Adu08g00106 452 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 294 304 IPR025660 -
Adu08g00106 452 SMART Inhibitor_I29_2 42 99 IPR013201 -
Adu08g00106 452 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 384 - -
Adu08g00106 452 PANTHER OS05G0508300 PROTEIN 27 384 - -
Adu08g00106 452 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Adu08g00106 452 Pfam Granulin 378 425 IPR000118 -
Adu08g00106 452 SUPERFAMILY Granulin repeat 364 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00106 Adu-Chr8 1401470 1403883 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00106 - - ahf:112705594 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00106 08 1401470 1403883 Adu08g00106 08 1401470 1403883 ECH