Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00053 ATGCTAGGAATTTTAAGGGCATTAAGACTTGGGCAAACCCCTCAAAGGGCATCCATATTCCAACAATGCCATGGAAATGGAATCATTAGCCCCAACAAATTGTCTTCTGGTTTCGGATGTGTGACATCCTCCCCACCCACCATGCAGCTGAAAGGATTGGAGAATGTTACTGTCTCAGAGGTGCTTATGACAAAAGGGCAAGAGAAGATTGGTTCCTGGCTCTCATGCCAAGTTGACGATGCTGTTATCAATGCAATGAAGAACATGGCTGAAAACAATATTGGATCATTGGTTGTACTAAAGTCAGAGGGCCACCTAGCAGGCATTGTCACAGAAAGAGATTGCTTGAAGAAAATAGTTGCACAAGGAAGATCACCCTATCACACACAAGTTGGTGAAATAATGACTAATGAGCAAAACTTGATAACGGTGACCTCTGACATGAACATTCTTCAAGCAATGCGACTTATGACAGAGAATCGTATCAGACATGTTCCAGTTATAGACGGGAAAATAGTGGGAATGATATCCATTGTAGATGTAGTTCGAGCAGTGATGGAGCAGCAAAATGGAGAATTGAAACGACTCAATGATTACATCAAAGGAGAATACTATTAG 618 0.4175 MLGILRALRLGQTPQRASIFQQCHGNGIISPNKLSSGFGCVTSSPPTMQLKGLENVTVSEVLMTKGQEKIGSWLSCQVDDAVINAMKNMAENNIGSLVVLKSEGHLAGIVTERDCLKKIVAQGRSPYHTQVGEIMTNEQNLITVTSDMNILQAMRLMTENRIRHVPVIDGKIVGMISIVDVVRAVMEQQNGELKRLNDYIKGEYY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00053 205 ProSiteProfiles CBS domain profile. 63 126 IPR000644 -
Adu08g00053 205 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 1 204 - -
Adu08g00053 205 SUPERFAMILY CBS-domain pair 72 200 IPR046342 -
Adu08g00053 205 ProSiteProfiles CBS domain profile. 135 193 IPR000644 -
Adu08g00053 205 CDD CBS_pair_bac_euk 74 183 IPR044725 -
Adu08g00053 205 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 1 204 - -
Adu08g00053 205 SMART cbs_1 140 186 IPR000644 -
Adu08g00053 205 SMART cbs_1 72 120 IPR000644 -
Adu08g00053 205 Pfam CBS domain 131 186 IPR000644 -
Adu08g00053 205 Pfam CBS domain 74 120 IPR000644 -
Adu08g00053 205 Gene3D - 51 204 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00053 Adu-Chr8 761188 762222 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00053 - - adu:107460011 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00053 08 761188 762222 Adu08g00053 08 761188 762222 ECH