Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00049 ATGGGTGAACAAACACTAGGTCAAGAACAATCCCTAACACCAACCCCGATTGACCCTCCACCTCAACCTCCCTCCAACACCCCCGCTGCCGCGCCTGTCATCGAGACCACCACCGTTGCCAACGCCACCATTGCTCATGTTTCCCCCACAGAATCCGAACTGAGCAACAATAATGCTCCTCCTCCGCCAACAAACCCTACCGCACCACCTTCCAAAATCCCCCTCCGCCCTCGCAAGATCCGGAAGCTCTCCCCTGATCCCGCCGTCTCCCAGCCTCAATTGTCCTCTGCCGCCATCACTGAACCTCCAAAACCAACCTCATCCTCCAACTCGTCCTCCGCAGCCAAGTCTGCCAGCCGGAGCACCAAAACCGCTCAGCAGCAGCAGCAGCAACAGCAACAACAACAACGAGCCCTAGCGGTTCCGAGGGTTGTAGCGAGGTCGCTATCGTGCGAAGGAGAGGTGGAGATCGCACTCCGCTACCTCCGCAACTCGGATCCGCTCCTCTCCCCTCTAATCGACATCCACCAAGCACCAACCTTCGACAATTTCCACACCCCTTTCCTTGCCCTAACGCGCAGCATTCTCTATCAGCAGCTCGCCTATAAGGCTGGAACCTCTATCTATACTCGATTCATCTCTCTCTGCGGCGGCGAAGCCGGCGTTGTTCCTGAAACCGTTCTTGCCCTAACTCCTCAGCAGCTCCGCCAAATTGGGGTTTCTGGAAGGAAGGCCAGTTACCTTCACGACTTGGCCAGGAAGTACCAGAATGGGATACTCTCCGATTCGGCCATTGTAAATATGGATGATAAATCTCTGTTCACCATGCTCACAATGGTGAACGGGATTGGGTCCTGGTCTGTTCATATGTTCATGATATTCTCACTCCATAGACCCGATGTTCTTCCCATCAACGATCTTGGAGTCCGCAAAGGGGTTCAGCTTCTCTACAATCTTGAGGACTTGCCCCGCCCTTCTCAGATGGATCAGTTGTGTGAGAAATGGAGGCCTTATCGCTCTGTTGCTTCGTGGTATATGTGGAGATTCGTTGAAGCCAAGGGAACGCCTTCTAGTGCGGTGGCTGTGGCCACTGGTGCGAGTTTGCAGCACCACCAGCAGGAGCAGCAGCAGCAACAGCAGCAGCACCCTTCACAGCCTCAGCTTCTGGATCCCATAAACACCATGTTTAATATGGGGGCGGCCTGTGCTTGGGGACAATGA 1221 0.5471 MGEQTLGQEQSLTPTPIDPPPQPPSNTPAAAPVIETTTVANATIAHVSPTESELSNNNAPPPPTNPTAPPSKIPLRPRKIRKLSPDPAVSQPQLSSAAITEPPKPTSSSNSSSAAKSASRSTKTAQQQQQQQQQQQRALAVPRVVARSLSCEGEVEIALRYLRNSDPLLSPLIDIHQAPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFISLCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQHHQQEQQQQQQQHPSQPQLLDPINTMFNMGAACAWGQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00049 406 MobiDBLite consensus disorder prediction 29 58 - -
Adu08g00049 406 SMART endo3end 196 351 IPR003265 GO:0006284
Adu08g00049 406 MobiDBLite consensus disorder prediction 368 390 - -
Adu08g00049 406 Pfam HhH-GPD superfamily base excision DNA repair protein 193 336 IPR003265 GO:0006284
Adu08g00049 406 SUPERFAMILY DNA-glycosylase 180 349 IPR011257 GO:0003824|GO:0006281
Adu08g00049 406 MobiDBLite consensus disorder prediction 88 135 - -
Adu08g00049 406 PANTHER BNAC05G15000D PROTEIN 64 400 - -
Adu08g00049 406 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 64 400 - -
Adu08g00049 406 CDD ENDO3c 188 349 IPR003265 GO:0006284
Adu08g00049 406 MobiDBLite consensus disorder prediction 59 73 - -
Adu08g00049 406 Gene3D - 161 348 - -
Adu08g00049 406 Gene3D Hypothetical protein; domain 2 185 298 - -
Adu08g00049 406 MobiDBLite consensus disorder prediction 14 28 - -
Adu08g00049 406 MobiDBLite consensus disorder prediction 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00049 Adu-Chr8 696968 701226 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00049 K01247 - gmx:100790760 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00049 08 696968 701226 Adu08g00049 08 696968 701226 ECH