Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g00042 ATGGCGGAGGTGGCGTGCTGTGGAACAAAGTTCTCGCTTTACGTGCTTGTAATCATAGGTTTGGTTTGCTTCGCGGGTCTTATGGCGGGTCTCACTTTGGGACTCATGTCTTTGGGAATCGTCGACCTCGAAGTTCTCATCAAGTCTGGTCGCCCTCAGGACCGCATCCATGCCTCTAAAATTTTCCCGGTGGTTAAGAATCAGCATCTTTTGCTTTGCACGCTTTTGATTGGGAACTCTTTAGCTATGGAGACTCTTCCCATTTTTCTTGATGCACTTGTGCCTTCCTGGGCAGCAATCGTTATTTCGGTCACACTCATCCTTATGTTTGGAGAGATATTGCCACAAGCAGTGTGTACTCGATATGGATTGACAGTTGGTGCAACATTGGCCCCGCTTGTTCGTATTCTCCTTCTAGTGTTCTTCCCAATCTCGTATCCAATCAGCAAGGTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTGAAGAGGGCAGAGCTCAAAACTTTTGTGAATTTTCATGGGAATGAGGCTGGTAAAGGAGGAGATTTAACACATGATGAGACAACCATCATTACTGGTGCACTTGACTTGACTGAAAAGACTGCAAAAGATGCTATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATGCGATAATGTCCATGGGTCATAGTAGAGTTCCAGTTTATTCAGGAGAGAAAACAAATATTATTGGACTTGTTCTGGTAAAGAATCTTTTTATGGTTGATTCAAAGGCTGCAGTTCCTTTAAGAAAAATGATCATCAGAAAAATTCCACGTGTTTCAGAGAATATGCCTCTGTATGATATATTGAACGAGTTTCAAAAGGGTCACAGTCATATTGCAGTTGTGTATAGGGATCTAAATAATACAACAGAAGCACTCAGAAAAGTCAAAGGTGGCGATCAACATGAGGTCAAAGACAGCTGCAGGAAGAAGGGAGAAAAGGCATCCTCGGATAAAGTTCTTTCTAAGGGTATCTTTGATTACTCCTGTTTTGCTGGCTGTGCTGGTATTTTCTGGAGCTTCTGTAAAACGAAATCGTCAGGTGGATCGGAGTCAAATGATGGGTCACCACAGGTGAAGAAAAGTCCACCAGCAACTCCTGCTTTTAAAAAGCGACATAGAGGTTGTTCGTATTGCATCATGGACATTGATAATTCCCCGCTGCCGGTGTTTCCACCAAATGAAGTAGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAGATTTTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAATTAACATGAATGCATCTAACTCTAAGGACAAGGCTCCTGATGCAAATATGGAGCAACCTTCTTCTGTAGCTGTTCAAGGGCACACACCAACGAACTCACTTTCGACAGCTACATCTGTAACGGGCTCACCAACCACCATTGATCAAATCTCTGAAAGTGAGTCACTCAGGAATCAATGA 1536 0.4258 MAEVACCGTKFSLYVLVIIGLVCFAGLMAGLTLGLMSLGIVDLEVLIKSGRPQDRIHASKIFPVVKNQHLLLCTLLIGNSLAMETLPIFLDALVPSWAAIVISVTLILMFGEILPQAVCTRYGLTVGATLAPLVRILLLVFFPISYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALDLTEKTAKDAMTPISKAFSLDLDATLNLETLNAIMSMGHSRVPVYSGEKTNIIGLVLVKNLFMVDSKAAVPLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNNTTEALRKVKGGDQHEVKDSCRKKGEKASSDKVLSKGIFDYSCFAGCAGIFWSFCKTKSSGGSESNDGSPQVKKSPPATPAFKKRHRGCSYCIMDIDNSPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKINMNASNSKDKAPDANMEQPSSVAVQGHTPTNSLSTATSVTGSPTTIDQISESESLRNQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g00042 511 CDD CBS_pair_CorC_HlyC_assoc 204 305 IPR044751 -
Adu08g00042 511 MobiDBLite consensus disorder prediction 458 511 - -
Adu08g00042 511 Pfam Cyclin M transmembrane N-terminal domain 17 188 IPR002550 -
Adu08g00042 511 MobiDBLite consensus disorder prediction 371 392 - -
Adu08g00042 511 Gene3D - 390 440 IPR046342 -
Adu08g00042 511 Gene3D - 188 321 IPR046342 -
Adu08g00042 511 ProSiteProfiles CNNM transmembrane domain profile. 7 190 IPR002550 -
Adu08g00042 511 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 2 497 IPR045095 GO:0010960
Adu08g00042 511 SUPERFAMILY CBS-domain pair 195 309 IPR046342 -
Adu08g00042 511 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g00042 Adu-Chr8 553208 557485 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g00042 K16302 - gmx:100527789 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g00042 08 553208 557485 Adu08g00042 08 553208 557485 ECH