Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02556 ATGTCGTCCCTCAGTAGGGAGTTGGTGTTCCTGATCTTGCAGTTTCTGGACGAGGAAAAGTTCAAAGAGACTGTTCATAAGCTTGAACAGGAGTCTGGGTTTTTCTTTAACATGAAGTATTTTGAGGATGAAGTGCACAATGGCAATTGGGATGAGGTTGAGAGGTATCTCTCTGGTTTCACTAAAGTAGATGATAATAGGTACTCTATGAAGATATTTTTCGAGATAAGGAAGCAGAAGTACCTGGAGGCATTGGATAAGCATGATCGGTCCAAGGCTGTAGAGATATTGGTGAAGGATTTGAAGGTCTTTGCAACATTTAATGAAGAACTTTTTAAGGAAATCACACAGCTTTTGACATTGGAGAATTTCAGGGAAAATGAACAATTGTCTAAATATGGCGATACGAAGTCTGCAAGAGCAATCATGTTGGTTGAGCTAAAAAAACTAATCGAAGCAAATCCTTTATTCCGTGACAAGTTGCAATTTCCCAACCTTAAAAACTCAAGGTTACGTACTCTCATCAATCAAAGCTTGAATTGGCAGCATCAACTTTGTAAGACTCCACGTCCAAATCCAGATATAAAAACACTTTTTGTGGATCACTCATGTGGACAACCCAACGGTGCAAGAGCTCCATCTCCTGCTAATAATCCACTACTAGGATCCTTGCCGAAGGCTGGAGGGTTTCCTCCTCTTGGTGCACATGGGCCTTTTCAACCTACTCCAGCACCTGTGCCAACACCCCTGGCTGGTTGGATGTCGAATCCTACCACTGTAGCACATGCTGCAGTTTCTGGAGGAGCCACTATAGGTCTTGGTACTGCTACAGGTCTTGGTGCACCATCAATCCCTGCTGCTTTGAAGCACCCTAGGACCCCTCCAACTAATCCTTCTGTTGACTACCCATCTGGAGATTCAGATCATGTCTCTAAGAGAACAAGACCAATGGGAATGTCGGATGAGGTAAATCTTCCTGTCAATGTGTTGTCAGCCACGTTCCCAGGTCATGGTCATGGACAGGCTTTTAATGCACCAGATGACTTGCCAAAGACTGTTATGCGGACTCTGAACCAGGGTTCATCTCCTATGAGCATGGACTTCCATCCAGTTCAACAGACTATACTTCTTGTTGGTACAAATGTTGGGGACATTGCTTTGTGGGAAGTGGGTTCTAGGGAGCGGTTGGTCTTGAGGAATTTCAAAGTTTGGGATCTTAGTGCTTGTTCAATGCCTTTTCAGGCTGCTCTTGTCAAAGATCCAGGTGTTTCTGTCAACCGTGTGATTTGGAGTCCAGATGGTGCTTTATTCGGAGTTGCTTACTCAAGGCACATTGTTCAGATATACTCTTATCATGGTGGCGATGAAGTACGGCAGCACCTGGAGATTGATGCTCATGTTGGTGGAGTAAATGACTTAGCATTTTCCCATCCAAATAAACAACTATGTGTGATAACTTGTGGTGATGATAAGACCATTAAGGTGTGGGATGCTGCTACGGGTGCAAAGCAGTATACCTTTGAAGGTCACGAGGCTCCAGTTTATTCTGTCTGCCCACATTATAAAGAAAACATTCAGTTCATCTTTTCAACAGCATTAGATGGAAAGATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGATTATGATGCTCCTGGTCGTTGGTGCACCACCATGGCCTATAGCGCTGATGGTACAAGGCTCTTTTCATGTGGGACAAGCAAGGATGGGGAATCGTCTATTGTTGAGTGGAATGAAAGCGAGGGAGCTGTTAAAAGGACCTATCAAGGATTTCGCAAACGATCTTTGGGTGTTGTACAATTTGATACAACCAAAAATCGATTTTTGGCTGCGGGTGATGATTTCTCCATTAAGTTCTGGGATATGGACAATATTCAGCTTTTGACACAAGTTGATGCTGATGGGGGTCTCCCTGCAAGTCCACGGATTCGTTTCAACAAGGATGGAGCTCTTTTAGCTGTCTCAGCAAATGAAAATGGAATTAAAATCTTAGCCAATGCAGATGGTATGCGCTTGTTGCGTTCATTAGAGAATTCTATGTATGATGCATCAAGAACGTCAGAAGCCATGGCAAAGCCTACAATAAATCCAATTTCCGCAGCTGCTGCCAGTAGTGCTGCACTTTCAGAAAGGGTCCCATCTGTGGTAGCTATGGCTGGAATGAATGGAGATGCCCGAAACTTGGGAGATGTTAAACCTAGAATAAGTGAAGAATCCAATGATAAGTCAAAAATATGGAAGCTTACTGAAATCAGTGAACCATCTCAATGTAGATCCTTAAAGCTACCTGAGAATGTACGAGTAACTAAGATATCAAGGTTGATATACACTAATTCAGGCAATGCTATTCTGGCATTAGCTTCAAATGCCATTCATCTGCTTTGGAAGTGGCCGCGAAGTGACCGTAATTCTTCTGGCAAGGCCACTGCCAGTGTGCCACCTCAGCTATGGCAACCTTCAAGTGGCATCCTGATGACAAATGACATTGGTGATAGCAATACTGAGGATGCTGTTCCTTGCTTTGCTCTTTCTAAAAATGATTCTTATGTAATGTCAGCATCAGGGGGGAAGATTTCTCTGTTCAATATGATGACTTTTAAGACAATGACTACTTTCATGCCTCCACCACCTGCTGCAACCTTTCTTGCTTTCCATCCTCAGGATAACAATATCATTGCTATAGGCATGGATGATTCTTCAATTCAGATATATAATGTCCGTGTAGATGAGGTTAAAAGTAAACTCAAAGGCCACACTAAAAGAATCACAGGTCTTGCTTTCTCTCATGTATTGAATGTCCTAGTTTCTTCTGGGGCAGATGCTCAGATTTGTGTGTGGAATACTGATGGATGGGAGAAACAGAAGACTAGATTCTTGCAACTTCCTGCTGGAAGGACTCAACCAGTTCAGGCAGATACACGTGTACAGTTTCATCAGGATCAGATACGCTTCTTGGTTGTACATGAAACGCAGCTTGCAATTTATGAAGCAACGAAACTAGAATGTCTAAAGCAGTGGTTTCCACAAAGTTCTGCTGCACCTATATCGCATGCAACTTTCTCATGCGATAGTCAGCTCATATACGCCAGCTTCTTAGATGCAACAGTCTGTGTGTTTAGTGCTTCAAACCTCAGATTACGCTGTCGAGTCAATCCTTCTGCATATCTTTCTGCAGGTGTCAGTTCTAACGTACAACCGCTTGTAATCGCTGCACATCCACAAGAACCAAATCAATTTGCAGTTGGACTTTCGGACGGTGGAGTGCATGTGTTTGAGCCCCTTGAGTCTGAAGGAAAATGGGGCATGCCTCCACCCATTGAGAATGGGTCAGCAAGCAATGCAGCAGCTGTCTCAGTTGGTGCTTCTTCAGAAGAAGCTGCCCAGAGATGA 3417 0.4346 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVERYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKTPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSLPKAGGFPPLGAHGPFQPTPAPVPTPLAGWMSNPTTVAHAAVSGGATIGLGTATGLGAPSIPAALKHPRTPPTNPSVDYPSGDSDHVSKRTRPMGMSDEVNLPVNVLSATFPGHGHGQAFNAPDDLPKTVMRTLNQGSSPMSMDFHPVQQTILLVGTNVGDIALWEVGSRERLVLRNFKVWDLSACSMPFQAALVKDPGVSVNRVIWSPDGALFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNIQLLTQVDADGGLPASPRIRFNKDGALLAVSANENGIKILANADGMRLLRSLENSMYDASRTSEAMAKPTINPISAAAASSAALSERVPSVVAMAGMNGDARNLGDVKPRISEESNDKSKIWKLTEISEPSQCRSLKLPENVRVTKISRLIYTNSGNAILALASNAIHLLWKWPRSDRNSSGKATASVPPQLWQPSSGILMTNDIGDSNTEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRITGLAFSHVLNVLVSSGADAQICVWNTDGWEKQKTRFLQLPAGRTQPVQADTRVQFHQDQIRFLVVHETQLAIYEATKLECLKQWFPQSSAAPISHATFSCDSQLIYASFLDATVCVFSASNLRLRCRVNPSAYLSAGVSSNVQPLVIAAHPQEPNQFAVGLSDGGVHVFEPLESEGKWGMPPPIENGSASNAAAVSVGASSEEAAQR 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02556 1138 PANTHER TOPLESS-LIKE PROTEIN 1 1136 - -
Adu07g02556 1138 SMART Lish 4 36 IPR006594 GO:0005515
Adu07g02556 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 924 965 IPR001680 GO:0005515
Adu07g02556 1138 MobiDBLite consensus disorder prediction 1120 1138 - -
Adu07g02556 1138 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Adu07g02556 1138 Gene3D - 324 552 IPR015943 GO:0005515
Adu07g02556 1138 MobiDBLite consensus disorder prediction 1108 1138 - -
Adu07g02556 1138 SMART ctlh 34 92 IPR006595 -
Adu07g02556 1138 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 426 961 IPR011047 -
Adu07g02556 1138 ProSitePatterns Trp-Asp (WD) repeats signature. 484 498 IPR019775 -
Adu07g02556 1138 SUPERFAMILY WD40 repeat-like 353 457 IPR036322 GO:0005515
Adu07g02556 1138 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Adu07g02556 1138 SMART WD40_4 874 914 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 500 541 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 544 587 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 590 630 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 350 389 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 834 871 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 1008 1049 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 917 956 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 1058 1101 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 456 497 IPR001680 GO:0005515
Adu07g02556 1138 SMART WD40_4 411 450 IPR001680 GO:0005515
Adu07g02556 1138 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 924 956 - -
Adu07g02556 1138 Gene3D - 780 1109 IPR015943 GO:0005515
Adu07g02556 1138 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1136 IPR027728 GO:0006355
Adu07g02556 1138 MobiDBLite consensus disorder prediction 290 312 - -
Adu07g02556 1138 Pfam WD domain, G-beta repeat 463 497 IPR001680 GO:0005515
Adu07g02556 1138 Pfam WD domain, G-beta repeat 923 956 IPR001680 GO:0005515
Adu07g02556 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 608 639 IPR001680 GO:0005515
Adu07g02556 1138 Gene3D - 556 693 IPR015943 GO:0005515
Adu07g02556 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 463 506 IPR001680 GO:0005515
Adu07g02556 1138 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 927 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02556 Adu-Chr7 79524743 79532395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02556 461 674 Miscellaneous Gene Families AT5G08390 23.744 7.09e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02556 - - gmx:100790282 2125.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00107 09 985448 993403 Adu07g02556 07 79524743 79532395 ECH
Adu07g02556 07 79524743 79532395 Adu07g02556 07 79524743 79532395 ECH
Adu09g00107 09 985448 993403 Adu07g02556 07 79524743 79532395 PCT