Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02504 ATGAGCTATGGACATCCTTACATGGGTTCAGGTAGCCGAACTGCTCGAAGAACTTTTGAGTTCGGGAAGACACATGTAGTGAGGCCAAAAGGAAAACACCAAGCCACCATAGTATGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAGCTCCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGTCCTGTGGCCATACTTGGAGGCTTTCCTTGCACTGCATGGTTTGATGTGGGAGAACTCTCAGAAGAGGGTCCAGATGATTGGGAAGGTTTAGATGCCTCAGCAGCACACATAGCTAACTTGCTGTCAACAGAACCAGCTGATGTGAAAGTTGGAATAGGAGGGTTCAGTATGGGTGCAGCAATAGCACTTTACTCTGCAACATGTTTTGCTATGGGAAGGTATGGAAATGGCATCCCATACCCTGTCAACTTAAGAGCTGTTGTTGGACTAAGTGGCTGGCTTCCAGGCTCAAGGAGCTTAAGGAACAAAATAGAAGTGTCACATGAATCAAGAAGGCGAGCTGCTTCATTACCCATGTTGCTGTGTCATGGAATATGTGATGATGTAGTTCCATGCAAATATGGAGTGGGTAAGATTGGTCACTATACAGTTCCAAGAGAGATGGATGAGTTTAAAATTGTGTCAGCTTCTGATGACAATGTTCTAAAATTGTGGGATTGGAAGAAGGGTTGGGCTTGTCTTAAAACCTTTCAAGGACACTCACATTATGTGATGAGTGTAGCATTTAACCCCAAGGATCCATCTATCTTTGCTAGTGCATCCCTTGATGGGACTTTAAAGGGACACTTGAAAGGAGTGAATTGTGCTGATTACTTCATAAGCAATGATAAAGAATATCTTATAAGTGGTTCTGATGATTACACTGCAAAAGTGTGGGATTATCATTCTAAAAACTCTGTACAAACACTTGAAGGACATGGAAACAATGTCACAGCAGTGTGCTCTCATCCTGAGCTTCCTATTATAATAACAGCTTCAGAGGATTCTACTGTCAAAATATGGGATAATGTCACATACAGGCTTCAAAACACCTTGAAATTTGATATTGGGCctaagtGCATGAATGTGGCTCGATCTGCAGTGCTTCCTTCAGGAAAAGATAGGGCTGCTTCTCGAGATGCAGATGCAGCATTGGTTTTTGGCCGTAGTAGTAGTAGTGGTAGAAGAAGAAGTTGTAGTTTAGAGTTGGTTTTTAAGCATGATAAGATGCAGAATTGA 1275 0.4243 MSYGHPYMGSGSRTARRTFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEEGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAIALYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRSLRNKIEVSHESRRRAASLPMLLCHGICDDVVPCKYGVGKIGHYTVPREMDEFKIVSASDDNVLKLWDWKKGWACLKTFQGHSHYVMSVAFNPKDPSIFASASLDGTLKGHLKGVNCADYFISNDKEYLISGSDDYTAKVWDYHSKNSVQTLEGHGNNVTAVCSHPELPIIITASEDSTVKIWDNVTYRLQNTLKFDIGPKCMNVARSAVLPSGKDRAASRDADAALVFGRSSSSGRRRSCSLELVFKHDKMQN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02504 424 ProSiteProfiles Trp-Asp (WD) repeats profile. 249 279 IPR001680 GO:0005515
Adu07g02504 424 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 207 - -
Adu07g02504 424 Gene3D - 223 398 IPR015943 GO:0005515
Adu07g02504 424 Pfam WD domain, G-beta repeat 318 354 IPR001680 GO:0005515
Adu07g02504 424 Pfam WD domain, G-beta repeat 276 312 IPR001680 GO:0005515
Adu07g02504 424 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 207 - -
Adu07g02504 424 PRINTS G protein beta WD-40 repeat signature 225 239 IPR020472 -
Adu07g02504 424 PRINTS G protein beta WD-40 repeat signature 299 313 IPR020472 -
Adu07g02504 424 PRINTS G protein beta WD-40 repeat signature 341 355 IPR020472 -
Adu07g02504 424 Pfam Phospholipase/Carboxylesterase 24 208 IPR003140 GO:0016787
Adu07g02504 424 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 322 354 - -
Adu07g02504 424 SMART WD40_4 283 312 IPR001680 GO:0005515
Adu07g02504 424 SMART WD40_4 242 282 IPR001680 GO:0005515
Adu07g02504 424 SMART WD40_4 315 354 IPR001680 GO:0005515
Adu07g02504 424 ProSiteProfiles Trp-Asp (WD) repeats profile. 278 321 IPR001680 GO:0005515
Adu07g02504 424 SUPERFAMILY WD40 repeat-like 224 370 IPR036322 GO:0005515
Adu07g02504 424 Gene3D alpha/beta hydrolase 15 222 IPR029058 -
Adu07g02504 424 SUPERFAMILY alpha/beta-Hydrolases 25 208 IPR029058 -
Adu07g02504 424 ProSiteProfiles Trp-Asp (WD) repeats profile. 322 354 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02504 Adu-Chr7 79246981 79252330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02504 1 198 Acyl Lipid Metabolism Gene Families AT1G52700 78.283 1.92e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02504 K06130 - gmx:100798395 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00133 09 1293988 1298313 Adu07g02504 07 79246981 79252330 ECH
Adu07g02504 07 79246981 79252330 Adu07g02504 07 79246981 79252330 ECH
Adu07g02504 07 79246981 79252330 Adu09g00133 09 1293988 1298313 PCT