Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02411 ATGAAGAGCATTCTTTCTAATAAACCATGCTTCACTATTCTTCTTACTGTTTTTGTTGTAGTAGCAATTCATCATGTTGAATGCCGCATTCTCCACACATACACTACTAGTCCTTATGATGAGTTATTAGTCTCTGATGGAGTTGATAATAATAATAATAATAATGAAAGACAAGAGGTTTTTGTTGTTGATGAGTCTTCTTCTGGTGGGAAGTATTGCAAACAAATGTATGGGTTCTTGCCATGTTCCAACAACATTTTTGGTCACTTGTTCCTGATATTGGTGTATGAGTACTTGTTGTTCCATGGTGAATCATACTTGGCTGCTGGTGGTGAACAAATCTTCAAGATTCTTGGACCTGGTGTCTTTGGTGCTAGTGCCTTTGACATTCTTGGTGCTCTTCCTGAGTCTTTAATTCTAGTTGTGACTGGACTTTCAAGTGATAAGGAGAGTGCACAAGAGTATGCTTCAACTGGAGTTGGTTTGTTGGCTGGTTCTTCTATCTTGCTTCTCACTGTTGTGTGGGGAACCTGTGTCATCATTGGCAAGCAAAAGTTGAAACTTGACTCTGATTCTGATGCTACAAACTCATCATGTGGAGGGATAAAAGAATCACTTACATGTTATGGAATTACCATGGATGTGGACACAAGAAAGATGGCAAGAAATATGGTTTTCTCAGTGACACCACTGATTATAATGCAGATTACCAATTTGTTCCCAAACTCTTCCACACTGCGCAATGTGACATTAATGATTGCTTTTATTGTAGCTGTCATTTTCCTCATCTCATACTTCATTTACCAGGTATTCAAACCTCAGATAGAGAAAACAAGACTAGAGTATATAAAACATGATGATTTGATATTAAGAATATTGCAACGTGTTGAAAAGCAAACTCTGCAAAAGATTTTGGCTGAGGATGGCACTCCTAATGTTAATGCCATAAGTGGGCTATATCAAGAAATTAGTCAACATGAGGGCAAGGATTTATCAGCATCAGAAGTAAAAGAGTTACTACTCAAGAACAAATTATCAGACACAAACATCAAAGAGGAACAGATAGCAGACATGTTGAAGATTTTTGACAAAAATGGTGACCAAATTATAACCAAGGAAGAATTTGTGAGTGGCTTGACAGAATATATTAACCAAACAAAACATGCTTTGGATAGACAATACCTCCCAAAAGAATCACTCAACAAAGTTTATCAGACATTTATCAAGCCATGGATTGAACATGTGAGGAAAGAAAGAGAATTGAAGGGACATCTTGTATCTCAAGTCTTGAAGCATGTCCAGAGTGAGGATGTGGTTGGCAGGCTCCTTAATGATGATGGCACAGCCGATAAAGCCGCCATTAGAAGGCTATTTGAGGAAGTTGATGTCAATGGAGATAACCATGTTTCAAGATCTGAGCTAGAAAGAATAGTGAAAGACATCCATTTTAGTAAGGCTGTCGATGCGGAGGAGGCACTCTCGAAACTTGTTCAAGATCTTGATGTCAATAGAGACAATGAAATCAGCGAGAAAGAATTTGTTGATGGTTTCACAAAATGGATAAACTCAAATTCTAGCCAAGCTGCTAATTCAAAATCTTCATCTCATGGAACTCATCAAACATGGGAAGATGTTGAGAAGGTGATGGAACAAAACCAAAGCAAAGGAGCATCTGCATGGTTGGAGGCTATAGGATATGTGGTGTTGGGAATTACCATGTTGTCCCTTCTTGCAGAGCCACTCATAGCAAGTGTCCAGAACTTCTCTGAAGAAGCAGGACTTTCTTCTTTTTCCATCTCATTTATCTTGGTACCTCTGGCCACAAATTTCAGAGAAGCAACTGCAGCAATCAAAGAAGCTAGTCACAAGAAGAGCAGCAACACTTGTCAAACAATATATGAGATATATGGAGCAGTGTTCATGAACAACATTCTTGGATTTGTGGTGATATCTATTCTGATATATGTGAGGGACATAACTTGGGAATTCTCAGCAGATGTTCTTGTTGTGGCCATTGTTTGTGCTGTCATGGGGATTGCTGCTAGTTTCCGCACCACTTTCCCTCTTTGGACATCAATCCCTGCATACCTCTTATACCTCATCTCATTGCTCTTTGTTTTTGTTCTCAAAGATATCTTCAACTATATTTAG 2151 0.3859 MKSILSNKPCFTILLTVFVVVAIHHVECRILHTYTTSPYDELLVSDGVDNNNNNNERQEVFVVDESSSGGKYCKQMYGFLPCSNNIFGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILVVTGLSSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIIGKQKLKLDSDSDATNSSCGGIKESLTCYGITMDVDTRKMARNMVFSVTPLIIMQITNLFPNSSTLRNVTLMIAFIVAVIFLISYFIYQVFKPQIEKTRLEYIKHDDLILRILQRVEKQTLQKILAEDGTPNVNAISGLYQEISQHEGKDLSASEVKELLLKNKLSDTNIKEEQIADMLKIFDKNGDQIITKEEFVSGLTEYINQTKHALDRQYLPKESLNKVYQTFIKPWIEHVRKERELKGHLVSQVLKHVQSEDVVGRLLNDDGTADKAAIRRLFEEVDVNGDNHVSRSELERIVKDIHFSKAVDAEEALSKLVQDLDVNRDNEISEKEFVDGFTKWINSNSSQAANSKSSSHGTHQTWEDVEKVMEQNQSKGASAWLEAIGYVVLGITMLSLLAEPLIASVQNFSEEAGLSSFSISFILVPLATNFREATAAIKEASHKKSSNTCQTIYEIYGAVFMNNILGFVVISILIYVRDITWEFSADVLVVAIVCAVMGIAASFRTTFPLWTSIPAYLLYLISLLFVFVLKDIFNYI 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02411 716 Pfam EF-hand domain pair 453 515 IPR002048 GO:0005509
Adu07g02411 716 ProSitePatterns EF-hand calcium-binding domain. 363 375 IPR018247 -
Adu07g02411 716 ProSiteProfiles EF-hand calcium-binding domain profile. 350 385 IPR002048 GO:0005509
Adu07g02411 716 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 403 538 - -
Adu07g02411 716 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 14 397 - -
Adu07g02411 716 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 557 715 - -
Adu07g02411 716 Pfam Sodium/calcium exchanger protein 564 707 IPR004837 GO:0016021|GO:0055085
Adu07g02411 716 Pfam Sodium/calcium exchanger protein 105 271 IPR004837 GO:0016021|GO:0055085
Adu07g02411 716 SUPERFAMILY EF-hand 329 521 IPR011992 -
Adu07g02411 716 Gene3D - 389 532 - -
Adu07g02411 716 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Adu07g02411 716 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Adu07g02411 716 Gene3D - 310 388 - -
Adu07g02411 716 SMART efh_1 354 382 IPR002048 GO:0005509
Adu07g02411 716 SMART efh_1 492 520 IPR002048 GO:0005509
Adu07g02411 716 SMART efh_1 453 481 IPR002048 GO:0005509
Adu07g02411 716 CDD EFh 454 518 IPR002048 GO:0005509
Adu07g02411 716 ProSitePatterns EF-hand calcium-binding domain. 501 513 IPR018247 -
Adu07g02411 716 ProSiteProfiles EF-hand calcium-binding domain profile. 488 523 IPR002048 GO:0005509
Adu07g02411 716 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 557 715 - -
Adu07g02411 716 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 403 538 - -
Adu07g02411 716 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 14 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02411 Adu-Chr7 78374964 78379375 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02411 403 715 EF-hand Containing Proteins AT1G53210 38.739 1.18e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02411 - - ahf:112771843 1341.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02411 07 78374964 78379375 Adu07g02411 07 78374964 78379375 ECH