Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g02408 ATGAGGATGATTTCCAAAACACCATTAGTGTTCATTATCTCTCTTCCATTGCTGGTTAATGTCCATGGTCGCTATCTACTTCCAAATCATGCTTCTGAAGAATCAGTTTCAGATGGAGTTGAAGAAGTTGATGATCATAGTGTTCACCCCAACACAACTTCTTCTTATTTGCTACTCAAAGGAATTGATGAAGATCATAACTGTGACCAAATTTACGGATTTCTGCCATGCACAAACAACATATTTGGGAATCTCTTTCTAATTTTGGTGTATGGATACATCCTTTTTCATGGAGAATCGTATCTGAGTAGAGGGACTCAACGAATCTTCAAGATTCTTGGCCCTGGTTTGATTCTTTTTGTTCCAGTACTACTTGTGAAGAATGGAAAGATAGCAGAAGAATATGCTATGATTGGAATTGGATCATTGGCTGGATCATCAATCTTGCTTCTGACTATAGTTTGGGGAACATGTGTTATCACTGGCAGCAAAGATTTTGAGCACAGTGAAGGATCTAACTCATCATCATCATCATCACCTAAAACTCTCAAACCTTCATTCACTAGTCATGGCATTACTATAGATTTGGAGACAAAACAAGCAGCAAGCAATATGTTAGGTTCAACAATTTTATTACAATTATCTTATGGGACAACAACTCTGCAATCCATAATTGGTCTCATCTTTGCTTCCCTTCTTCTCTTCTTTTATTTTACTAAACAGGTTTTTGAACCTTGGCGACAGAAAAGAAGATTGGAATACTTGAAACATGATGATTTAATGTTAAGAATACTAAGTTTTGTAGAAAAGAATACTCTACAAAGGATACTCACCAAGAATGGGACTCCAAATGTGAGTGCCATTAGAAGGTTGTACAGGGAAATAGATGAAGATAGGAGCAGTGGCATATCAGCTTCTGAACTAAGAGACCTATTGCTACAAAACAAAGTAACAGACACAAGTATCGACGAGGAGAAAGAAATAGAAGAGGTATTGAAATTTTTTGATCATGGTCATGATCAAATGATAACCAAGGATGAGTTTGTTGTTGGCTTTGCAAAGTGGCTTGATCAAACAAAGCATGATTTGGATAAAGAGTATCTTTCAAGGAAATCAATGAAGGACTTATATGAGGTTTTTGGGCCATGGACTGAAAACAAAAGAAAAGAAAGAGAAGGGAAGAAACAAATCATATCTAAAATATTAAGGCATGTTCAGAATGATATGGTTGGAAGCCTTCTCAGAAATGATGGAAAACCTGATGAGATAGCCATTAAAAGGTTGTTCGAAAAAATTGACCGCAATAAAGACAACTGCGTCTCGCAATCTGAACTGAAAGAACTAATGATGAACATCGCATTTGTTAAAGCATCAATGGAAGTGGAGAAGGCAGTTGCTTTAGTCATTGATGAACTTGACCATGACATAGATCAGATAATCAATGAGGAGGAATTTGTTGCTGTGTTTGAGAAATCACTTAACAAAATTTCAAGTCATGCTCCTTTTTCTGATTCTGACTCTGAAGAAGATATATATCAAGCATGGGAAGAGGCAGGCATGGTGGTGGAAAATAAAGAAAGCAAAGCAATAGTAGATAAATCAATATGGGGAAGGTTGATGGCCACAACAAATATGGTGCTAGGAATTGTTATTATATGCATTGTGGCACAACCGCTTATGGAAAGTGTCAGAAAATTCTCCAACAGTTTAGGAGTTCATGCTGCCTTTGTCTCATTTGTTCTAGTCCCCTTGGCCATAAATGCAAGAGAAGCAACTACAGCAATTAAAAAAACAAGCTATAAGAATTCTAGGACTATTTCTCTTGCTATTTCTGAGATATATGGAGGGGTTCTCATGAATAACATTGTTGGATTTTTTGCTATCTCCATTATGATCTATGTCCGACAAGTTACTCATGTATTCCCATCAGAATTGATGGTCGCTACACTTGTTTGTCAGATTATAAGCGTTATTTTAGGTTGTCACTACACTTTCTCTCCATGGTCATGTGTATATGCTTATTTTGCATATTTTTTCTCCTTGGTTTTGAGTTTTTGTATTTAG 2064 0.3639 MRMISKTPLVFIISLPLLVNVHGRYLLPNHASEESVSDGVEEVDDHSVHPNTTSSYLLLKGIDEDHNCDQIYGFLPCTNNIFGNLFLILVYGYILFHGESYLSRGTQRIFKILGPGLILFVPVLLVKNGKIAEEYAMIGIGSLAGSSILLLTIVWGTCVITGSKDFEHSEGSNSSSSSSPKTLKPSFTSHGITIDLETKQAASNMLGSTILLQLSYGTTTLQSIIGLIFASLLLFFYFTKQVFEPWRQKRRLEYLKHDDLMLRILSFVEKNTLQRILTKNGTPNVSAIRRLYREIDEDRSSGISASELRDLLLQNKVTDTSIDEEKEIEEVLKFFDHGHDQMITKDEFVVGFAKWLDQTKHDLDKEYLSRKSMKDLYEVFGPWTENKRKEREGKKQIISKILRHVQNDMVGSLLRNDGKPDEIAIKRLFEKIDRNKDNCVSQSELKELMMNIAFVKASMEVEKAVALVIDELDHDIDQIINEEEFVAVFEKSLNKISSHAPFSDSDSEEDIYQAWEEAGMVVENKESKAIVDKSIWGRLMATTNMVLGIVIICIVAQPLMESVRKFSNSLGVHAAFVSFVLVPLAINAREATTAIKKTSYKNSRTISLAISEIYGGVLMNNIVGFFAISIMIYVRQVTHVFPSELMVATLVCQIISVILGCHYTFSPWSCVYAYFAYFFSLVLSFCI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g02408 687 ProSiteProfiles EF-hand calcium-binding domain profile. 323 358 IPR002048 GO:0005509
Adu07g02408 687 SMART efh_1 464 492 IPR002048 GO:0005509
Adu07g02408 687 SMART efh_1 327 355 IPR002048 GO:0005509
Adu07g02408 687 SMART efh_1 287 315 IPR002048 GO:0005509
Adu07g02408 687 SMART efh_1 424 452 IPR002048 GO:0005509
Adu07g02408 687 Pfam EF-hand domain pair 424 489 IPR002048 GO:0005509
Adu07g02408 687 Pfam Sodium/calcium exchanger protein 545 685 IPR004837 GO:0016021|GO:0055085
Adu07g02408 687 Gene3D - 240 351 - -
Adu07g02408 687 Gene3D - 352 497 - -
Adu07g02408 687 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 8 368 - -
Adu07g02408 687 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 376 497 - -
Adu07g02408 687 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 534 685 - -
Adu07g02408 687 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Adu07g02408 687 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 376 497 - -
Adu07g02408 687 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 8 368 - -
Adu07g02408 687 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 534 685 - -
Adu07g02408 687 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
Adu07g02408 687 SUPERFAMILY EF-hand 285 489 IPR011992 -
Adu07g02408 687 ProSiteProfiles EF-hand calcium-binding domain profile. 283 318 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g02408 Adu-Chr7 78308910 78313341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g02408 376 687 EF-hand Containing Proteins AT1G53210 34.251 1.80e-48 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g02408 - - aip:107612772 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g02408 07 78308910 78313341 Adu07g02408 07 78308910 78313341 ECH