Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g01856 ATGAGTGTGGATTTAAAGAAAACTACCTCTAATGGCCATGAGAAAATGTTAAGCTTAGAAGAGCAGCAGTCCCTGATCATGGAGGTCAGAAGGTTGATTGGACCACTGTCTGGTAAGGCATCTCTTTATTGTTCTGATGCATCCATTGCAAGGCATTTGAGGGCGCGGAATTGGAATGTCAAGAAGGCGGTTAAAATGTTGAAACAGACACTAAAATGGAGAGCAGAATACAAACCAGAAGAGATCCGATGGGAAGATGTTGCTCAGGAAGCGGATACTGGAAAGATCTACAGAACAGATTATGTTGACAAGCATGGGAGAACAGTCCTTGTCATGAGACCTAGTCGCCAGAACTCGAAGTCAATAAAAGGACAGGTTAAATATTTGGTATACTGCATGGAGAATGCTATTCTAAATCTTCCACCACAGCAGGAACAGATGGTCTGGCTAATTGACTTCCAGGGTTTCAATTTGTCACATATATCAGTCAGGGTGACCCGTGAAACTGCCCATGTATTGCAAGATCAGTATCCTGAACGTCTGGGTCTTGCAATACTGTACAATCCACCTAAGTTCTTTGAACCATTCTTCACGATGGTAAAGCCCCTATTGGAGCCTAAGACTTACAATAAAGTGAAGTTTGTTTACGCTGATGATAACAATACCAAGAAGATCATGGAGGATTTATTTGATTTGGACCAACTTGAATCTGCATTTGGCGGGAAGAATGACACAGGGTTTGACATAAACAGGTATGCGGAGAGGATGAAAGAGGACGACAAGAAGATTCCCTCTTTCTGGACAGGGGAGAACTCTCTATCATCAGTTCCAGTTGCTCCTCCATCGTTAGATTCAATTAAGTTAGATTCTGATTCTGACCCATCTGACTACGAGAAGAGAGAATCTTCCCCTGACTTAGACCCTGACCCTAGAATGGACACCGAGATCGTTAACCATAATGATGAGAATGTCTTGGTTAATCAAGAGTATGGAAACGCCAGAGTCGATACGCATTAA 1017 0.4258 MSVDLKKTTSNGHEKMLSLEEQQSLIMEVRRLIGPLSGKASLYCSDASIARHLRARNWNVKKAVKMLKQTLKWRAEYKPEEIRWEDVAQEADTGKIYRTDYVDKHGRTVLVMRPSRQNSKSIKGQVKYLVYCMENAILNLPPQQEQMVWLIDFQGFNLSHISVRVTRETAHVLQDQYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTYNKVKFVYADDNNTKKIMEDLFDLDQLESAFGGKNDTGFDINRYAERMKEDDKKIPSFWTGENSLSSVPVAPPSLDSIKLDSDSDPSDYEKRESSPDLDPDPRMDTEIVNHNDENVLVNQEYGNARVDTH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g01856 338 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Adu07g01856 338 Gene3D - 3 270 IPR036865 -
Adu07g01856 338 MobiDBLite consensus disorder prediction 320 338 - -
Adu07g01856 338 CDD SEC14 92 242 IPR001251 -
Adu07g01856 338 SMART sec14_4 90 244 IPR001251 -
Adu07g01856 338 SUPERFAMILY CRAL/TRIO N-terminal domain 20 86 IPR036273 -
Adu07g01856 338 Pfam CRAL/TRIO domain 94 241 IPR001251 -
Adu07g01856 338 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Adu07g01856 338 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Adu07g01856 338 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Adu07g01856 338 PANTHER GH16843P 1 303 - -
Adu07g01856 338 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 303 - -
Adu07g01856 338 MobiDBLite consensus disorder prediction 289 318 - -
Adu07g01856 338 MobiDBLite consensus disorder prediction 271 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g01856 Adu-Chr7 56505576 56509949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g01856 - - gmx:100780151 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g01856 07 56505576 56509949 Adu07g01856 07 56505576 56509949 ECH
Adu07g01856 07 56505576 56509949 Adu08g00685 08 12404125 12417780 PCT