Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00275 ATGGACGACAACGACGTGGAGGACGTTGAAGCCGTTCCTCAGGTTTACATGGCTTGCATCTTACACGGTCACAGAATAGGAGTTTCTTACTATGATTCCAGTGTTCGCCAACTTTATGTGCTTGAAGTATGGGATGATGGTGACAAGCTTTATCCAGTAATTGATATGGTAAAATATCAAGCAAACCCTGTAATCATTTATACAAGCTCTAAATGTGAGGAATCCTTCTTATCTGCTCTGCAACGAAGTGATGAAGCAGCCGAGGCTCCTCAAGTAAAGCTTGTTAAAAGCTCAATATTCAGTTATGAGCAAGCATGGCATAGATTAATTTACCTGCGAGTGGTGGGAATGGATGAAGGATTAAATGAAAAGGAGAGGGTTTATTATTTGAGTTCTATGATGGACATGGGAAGTGAAGTACAAGTTCGTGCTAGCGGTGGTCTTCTTGCAATATTAGAGAATGAAAGAATTGTAGATACTCTTGAGCAAATGGAATCTGGAAACACATCAATTACAGTAGATTCTGTAGCAGAAATTTCATTACATAAGTTTCTCAAACTTGATGTAGCAGCACATGAAGCCTTACAAATATTCCAAATGGACAAGCACCCTAGCCACATGGGCATTGGTAGACCAAAAGAAGGAACTTTTGGTAACATTTCTTTTCTATCTTCTCATTTCAGAAACTGGTTCATGAGGCCTATACTTGATCTTGAAGTTCTGAACTACCGTTTAAATTCTGTATCTTTCTTTCTATGCTCAGAAGAATTGGTCGTTTCTTTACGTGACACCCTGAAATCTGTGAAGGATATTCCCTACTTGCTAAAGAAATTTGACTCTCCGAGCTCCATATGCACCAGCTCTGATTGGACAGCTCTTCTCAAGAGTATTTGTGCGCTGTTGCATTTGGGAAAGATATTTGAAGTTGGGATTTCAGAAGGTCTTCGAGAAGAACTTAAATACTTGAATCTGGATATTGTTGAAAAGGCAAGTTCATCCATATCAACGGAACTTGCTTATGTCTATGAGCTGGTAATTGGTGTTATTGACGTAAACAGAACTAAAGAGAAGGGATATGCAACAATAGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGTTGAGGCAAATATATGAGGAACTGCCAGAATTTCTCCAACAGGTTTCATCATTAGAATTGGCACAATTTCCTGTTATATTCAAGGACAAGCCTATTCCTTGTATAGTTTACATACAGCAGATAGGATATTTGATGTGTATCTTTGAAGAAAAACTTGAAGAAACCACTCTGGAGAAGCTTGTGGATTGGGAATACACATTTTGTGACGCAGATGCAGAGACAAAAAGATACTTTTATCGTACACCAAAAACAAGAGAACTGGACAATCTTCTAGGAGATATCTATCATAAAATTTTAGATATGGAGAGGGCGATCACAAGAGACTTGTTTTCACATATAGTTCTGTTCTCAAGCCACTTGACAAAGGTGGCAATATTTGCAGCTGAACTGGACTGCTTTCTGTCTATGGCATTGGTTGCTCGGCAGAACAACTATATCAGGCCTTTGTTGACTGAAGAGAACTTACTCGATATAAAAAATGGAAGGCATGTTCTGCAGGAAATGACTGTCGATACTTTTATTCCTAATGACACCAAGATTCTTCGTGATGGAAGAATTAATATCATCACCGGTCCTAATTTTTCTGGAAAGAGTATCTATATAAAGCAGGTGGCTTTAATTGTTTTTCTATCCCACATTGGTAGTTTCGTGCCAGCAGATGCAGCAACAGTGGGTCTGACTGATAGAATATTTTGTGCAACGGGAAGCAGGCTGATGACAGCAGAACAATCAACATTCATGATTGATCTTCATCAAATAGGAATGATGCTAAGGCATGCTACTTCACGATCTCTATGTCTGGTAGATGAATTTGGCAAAGGGACTCTCACAGAAGATGGCATTGGTCTGCTAGCTGGGACCATAAATCACTTTGTAACGTATGATGAACCACCAAAGGTCTTCATATGCACTCATCTCATGGATTTGTTGCAAGGGCATTCTTTGACCAAGTCTCAGCAGATTAGCTTTCATACAATGAGTATACTGAAGCCCGACGATAATTCCACATGTCTTGAAGACATTGTATTTTTATATAGGCTTGTTCCAGGACATGCGCATCATAGCTACGGTGTGCCACATGAAATTATAAAAAGAGCTGCAGTTGTGTTGGATGCTGTTGCAAATAACAAGTGTGTTGAGCGTCTATGCAATGATAACATCACGGCCCGAGATCATCAGTACAAGAATGCCATAGAGAAGTTGTTGGAATTCGATATTGACAAAGGCGATTTAAACCAATTTTTTGATGATGTATTTTCTCTATCTCTTAATTCATGA 2397 0.3905 MDDNDVEDVEAVPQVYMACILHGHRIGVSYYDSSVRQLYVLEVWDDGDKLYPVIDMVKYQANPVIIYTSSKCEESFLSALQRSDEAAEAPQVKLVKSSIFSYEQAWHRLIYLRVVGMDEGLNEKERVYYLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQMESGNTSITVDSVAEISLHKFLKLDVAAHEALQIFQMDKHPSHMGIGRPKEGTFGNISFLSSHFRNWFMRPILDLEVLNYRLNSVSFFLCSEELVVSLRDTLKSVKDIPYLLKKFDSPSSICTSSDWTALLKSICALLHLGKIFEVGISEGLREELKYLNLDIVEKASSSISTELAYVYELVIGVIDVNRTKEKGYATIVKEGFCDELDELRQIYEELPEFLQQVSSLELAQFPVIFKDKPIPCIVYIQQIGYLMCIFEEKLEETTLEKLVDWEYTFCDADAETKRYFYRTPKTRELDNLLGDIYHKILDMERAITRDLFSHIVLFSSHLTKVAIFAAELDCFLSMALVARQNNYIRPLLTEENLLDIKNGRHVLQEMTVDTFIPNDTKILRDGRINIITGPNFSGKSIYIKQVALIVFLSHIGSFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGTINHFVTYDEPPKVFICTHLMDLLQGHSLTKSQQISFHTMSILKPDDNSTCLEDIVFLYRLVPGHAHHSYGVPHEIIKRAAVVLDAVANNKCVERLCNDNITARDHQYKNAIEKLLEFDIDKGDLNQFFDDVFSLSLNS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00275 798 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 24 778 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Adu07g00275 798 Pfam MutS domain V 561 732 IPR000432 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 SMART DNAend 211 542 IPR007696 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 Pfam MutS domain III 227 510 IPR007696 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 Gene3D - 518 780 IPR027417 -
Adu07g00275 798 PIRSF MSH2 1 781 IPR011184 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 SMART mutATP5 557 744 IPR000432 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 ProSitePatterns DNA mismatch repair proteins mutS family signature. 637 653 IPR000432 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 Pfam MutS family domain IV 366 467 IPR007861 GO:0005524|GO:0006298|GO:0030983
Adu07g00275 798 SUPERFAMILY DNA repair protein MutS, domain III 227 517 IPR036187 -
Adu07g00275 798 CDD ABC_MSH5_euk 530 731 - -
Adu07g00275 798 Gene3D - 186 401 - -
Adu07g00275 798 PANTHER MUTS PROTEIN HOMOLOG 5 24 778 - -
Adu07g00275 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 518 744 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00275 K08741 - gmx:100794332 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00275 07 2503827 2512469 Adu07g00275 07 2503827 2512469 ECH