Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00261 ATGCTTCTTCTCTCGGTCACCTCACCCGCGCCCCTCTCCTTGCTACTGCACGGTTCGTCTACTTCGTCTCTGTTGAAAGCGCTGCGAGGGGCAACAGAGCTACTAACTAAACCACCGAAGAAATTGGTAAGATCAATTTGTTATGGTGTTGAGGAAAGAGGGATGCACAAGTTCAGAAATTTCAAGAGGAGCTTTTCATTCCAGAAGAGTCAGAGTCTTCCTCAGTCACGATTCAATGAACGTTGCGATGGTAACAATTTCGAAGAGGCCATCGATGTTTTGTGTCAACGAAATTGTCTCAACGAAGCCATTGAGTTACTCCACCAAATTCATCGACCCTCCCCTCGCATTTACTCTACCCTCATCGCCGCTTGCGTTCGCCATCGAGCTCTCCAAGAGGGTAAAATGGTCCATGCTCACACCAAAGCTTCCGAGTTTGTTCCTGGGATCGCCATCTCAAATCGTTTGCTTGATTTGTATTCCAAATGTGGCAGCCTCGGTGATGCCCAGAAGCTGTTTGATGAAATGATTCACAGGGATTTGTGCTCTTGGAACACCATGATTGCTGGGTATGCCAAAATTGGACGCCTTCAACAAGCTAGAAAACTGTTTGATGAAATGCCCCAAAGAGATAACTTCTCCTGGAACGCTGTAATATCTGGTTATGTCAGGCATGGTTGTCCTTGGGAAGCTCTGGAGTTGTTTAGAAGCATGCAGAATCACGAGAGTTCGAATTCGAATAAGTTCACCTTGTCGAGTGCTCTGGCTGCTTCAGCTGCGATTCTTTGTTTGCGTCTTGGGAAGGAGATTCATGGCTACTTGACACGAACTGGTTTGGACTCGGACGAGGTAGTTTGGAGTGCACTTTTGGATTTGTATGGCAAATGTGGGAGCTTGAATGAAGCTAGGGGTATCTTTTATAAGATGGCAAACAAAGATGTAGTCTCATGGACTACCATGATTCATAGATGTTTTGAAGATGGAAGAAAGGAAGAGGGATTTTCCTTATTCAGAGAGTTGATGGGGTCAGGCATTAGGCCAAATGAGTATACATTTGCTGGAGTTTTAAATGCATGTGCTGGCCATGCTGTTGAACACTTAGGAAAGGAGGTTCACAGTTACATGGTCCGAACAGGGTGTGACCCGTGTTCGTATGCCGTGAGTGCACTTGTTCATTTGTACTCAAAGTGTGGGAATATTGAAAATGCCAGAAGGGTGTTCAACCAAATGCCTCGGCCAGGTTTGGTATCATGGACTTCTCTTATTGCTGGTTATGCTCAGAATGGTCAACCAGACGAAGCTCTTCGGTTATTTGAATTATTGCTTCGATCAGGTACTAAGCCCGATCAAGTTGTCTTTGTTGGGGTTCTTTCTGCTTGTACTCATGCTGGGTTAGTGGACAACGGTTTAGAATATTTCCATTCAATAAAGGAGAAGCATGGGTTGATGCATACTGCAGATCATTATGCATGTGTTATTGATTTATTGGCACGATCTGGACGGTTTAAAGAGGCAGAGGATATCATTGATAAAATGCCAATAAAACCTGATAAGTTCCTTTGGGCAGCCTTACTTGGAGGATGTAGAATACATGGAAACCTTGAATTGGCTGAAAGGGCAGCAAATGCATTATTTGAGATAGAGCCAGAGGACCCAGCTACGTACATCACTTTAGCTAATATTTACGCTAATGCCGGTCTGTGGACTGAGGAAGCCAAGGTTAGGAAGGCTATGGAAAGTAGGGGAATAGTGAAGAAGCCGGGTAAGAGCTGGACTGAGATCAAGAGACAGGTGCATGTCTTCCTGGTAGGAGATACATCCCACTCCAAAATATGTGATATTCATGCATTCCTAGGAGAAATCTCAAAGAAAATGAAGGAGAAAGGCTATATTCCGGACACAAACTTTGTGCTACGTGATGTGGAGGAGGAGCAGAAAGAGCAAAACCTTGTTTACCACAGTGAGAAGCTTGCCGTTGCCTTTGGAATCATTTCAACCCCTCCAGGAACTCCTATCAAGGTAGCTGAATATTTTGGTACGTGGAGTTTCCTACCTATCACTGATGACTTTGCTGATCAACTTCAAGCAAGGAAATTCAATGTATCAGGCTGCAAGAAATTGCGCACTCTAGACGCCGAGTTTGCCTGGAACTACAGCAATTTGACCACCACCAACAACAGCACCAACACCACCACCGTCAATGGCACACTCATTGAGATCTTTTTCCGGGCAAAGCTCAGAAACTATGAAGGGTGGGTAGCATGGGGTGTGAACCCAGGAAAGAAGCCACAGATGGTGGGAACCAAAGCCATCATAGCCATCAAACACAACAAGGGGACGACGGATGTGCACACGTATGACGTAACCAAAGAGACAAGAAAGGGTTGCAGGCTTTGGCCGACGTCTGCATCAGAGTTTGGGCTAAATGTGTTGGATATGCAAGCATGGAGCAATAGCACTAAGCAATGCACTACTCTGTATGCAAAGTTGATCCTTCCTTTTCCAGAGTATAACATAACTAGGCTGAACCATGTGTGGCAAGTTGGAGATAATGTTAATGGTGACCAACCATTGCAGCACAGAGTCACCCTTCAGAATGTGGATAGCACTGAGACAATTAACATCACTTCTCCCGATGGCCAAAGCTACGGTCAGAACCGGAGTTTCCTTAGATCAGTGCATGGAGTTCTAAACATCATAGGGTGGGGAACACTACTACCAATTGGAGTAATAATAGCTCGGTACTTTAGAGTGTTTCCATTTATTTGGGACAAAGTTTGGTTCAATATCCACGTTGGTTTCCAATTAACTGGTTTTCTAATTGGCACTGCTGGTTGGGCTATTGGTCTTAGTCTTGGAAGGTCTTCAGAGTATTACACCTTCCACACGCATCGAACCTTTGGCATTCTCATTTTCACATTTAGCACAATCCAAATGTTGGCATTTCGGTTAAAGCCGAAGATTACTGATGATTATAGGAAATACTGGAATATGTACCATCATTTTCTTGGCTATGGACTACTTGCAATCATAGTCATAAACATATTCAAAGGGATTTCAATGTTGAAAGGAGGAGTTGGATGGAAATGGGCATACATTGGAATCATTGCGTTTTTAGGTGCCATTATACTCACTTTTGAGGTTGTCACATGGCTACGTTTCATGTTGAAGCTACCAGCAATCTCAATTCCACCAAAAGAAAACAAGACTAGTAATAATCCCACACAAAACAAACAGTAG 3240 0.4407 MLLLSVTSPAPLSLLLHGSSTSSLLKALRGATELLTKPPKKLVRSICYGVEERGMHKFRNFKRSFSFQKSQSLPQSRFNERCDGNNFEEAIDVLCQRNCLNEAIELLHQIHRPSPRIYSTLIAACVRHRALQEGKMVHAHTKASEFVPGIAISNRLLDLYSKCGSLGDAQKLFDEMIHRDLCSWNTMIAGYAKIGRLQQARKLFDEMPQRDNFSWNAVISGYVRHGCPWEALELFRSMQNHESSNSNKFTLSSALAASAAILCLRLGKEIHGYLTRTGLDSDEVVWSALLDLYGKCGSLNEARGIFYKMANKDVVSWTTMIHRCFEDGRKEEGFSLFRELMGSGIRPNEYTFAGVLNACAGHAVEHLGKEVHSYMVRTGCDPCSYAVSALVHLYSKCGNIENARRVFNQMPRPGLVSWTSLIAGYAQNGQPDEALRLFELLLRSGTKPDQVVFVGVLSACTHAGLVDNGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAEDIIDKMPIKPDKFLWAALLGGCRIHGNLELAERAANALFEIEPEDPATYITLANIYANAGLWTEEAKVRKAMESRGIVKKPGKSWTEIKRQVHVFLVGDTSHSKICDIHAFLGEISKKMKEKGYIPDTNFVLRDVEEEQKEQNLVYHSEKLAVAFGIISTPPGTPIKVAEYFGTWSFLPITDDFADQLQARKFNVSGCKKLRTLDAEFAWNYSNLTTTNNSTNTTTVNGTLIEIFFRAKLRNYEGWVAWGVNPGKKPQMVGTKAIIAIKHNKGTTDVHTYDVTKETRKGCRLWPTSASEFGLNVLDMQAWSNSTKQCTTLYAKLILPFPEYNITRLNHVWQVGDNVNGDQPLQHRVTLQNVDSTETINITSPDGQSYGQNRSFLRSVHGVLNIIGWGTLLPIGVIIARYFRVFPFIWDKVWFNIHVGFQLTGFLIGTAGWAIGLSLGRSSEYYTFHTHRTFGILIFTFSTIQMLAFRLKPKITDDYRKYWNMYHHFLGYGLLAIIVINIFKGISMLKGGVGWKWAYIGIIAFLGAIILTFEVVTWLRFMLKLPAISIPPKENKTSNNPTQNKQ 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00261 1079 PANTHER OS07G0578800 PROTEIN-RELATED 77 675 IPR045215 GO:0003723|GO:0009451
Adu07g00261 1079 CDD Cyt_b561_FRRS1_like 869 1048 - -
Adu07g00261 1079 Gene3D Tetratricopeptide repeat domain 180 262 IPR011990 GO:0005515
Adu07g00261 1079 Gene3D Tetratricopeptide repeat domain 55 179 IPR011990 GO:0005515
Adu07g00261 1079 Gene3D Tetratricopeptide repeat domain 371 469 IPR011990 GO:0005515
Adu07g00261 1079 Gene3D Tetratricopeptide repeat domain 263 370 IPR011990 GO:0005515
Adu07g00261 1079 Gene3D Tetratricopeptide repeat domain 473 613 IPR011990 GO:0005515
Adu07g00261 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 414 448 IPR002885 -
Adu07g00261 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 347 IPR002885 -
Adu07g00261 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 312 IPR002885 -
Adu07g00261 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Adu07g00261 1079 Pfam PPR repeat 154 179 IPR002885 -
Adu07g00261 1079 Pfam PPR repeat 183 210 IPR002885 -
Adu07g00261 1079 Pfam PPR repeat 387 412 IPR002885 -
Adu07g00261 1079 Pfam PPR repeat 416 445 IPR002885 -
Adu07g00261 1079 Pfam PPR repeat 489 512 IPR002885 -
Adu07g00261 1079 Pfam PPR repeat 213 240 IPR002885 -
Adu07g00261 1079 ProSiteProfiles Cytochrome b561 domain profile. 858 1055 IPR006593 -
Adu07g00261 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 551 585 IPR002885 -
Adu07g00261 1079 SMART 561_7 893 1019 IPR006593 -
Adu07g00261 1079 Pfam PPR repeat family 312 360 IPR002885 -
Adu07g00261 1079 Pfam Protein of unknown function (DUF568) 765 874 IPR045265 -
Adu07g00261 1079 Pfam E motif 531 593 IPR046848 -
Adu07g00261 1079 Pfam DYW family of nucleic acid deaminases 629 676 IPR032867 GO:0008270
Adu07g00261 1079 PANTHER OS03G0235200 PROTEIN 77 675 - -
Adu07g00261 1079 SUPERFAMILY TPR-like 154 569 IPR011990 GO:0005515
Adu07g00261 1079 Gene3D - 873 1057 - -
Adu07g00261 1079 TIGRFAM PPR: pentatricopeptide repeat domain 284 314 IPR002885 -
Adu07g00261 1079 TIGRFAM PPR: pentatricopeptide repeat domain 416 449 IPR002885 -
Adu07g00261 1079 TIGRFAM PPR: pentatricopeptide repeat domain 213 240 IPR002885 -
Adu07g00261 1079 TIGRFAM PPR: pentatricopeptide repeat domain 183 210 IPR002885 -
Adu07g00261 1079 TIGRFAM PPR: pentatricopeptide repeat domain 315 349 IPR002885 -
Adu07g00261 1079 TIGRFAM PPR: pentatricopeptide repeat domain 489 512 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00261 Adu-Chr7 2404786 2411897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00261 112 593 Glycoside Hydrolase AT3G49170 27.530 5.65e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00261 - - gmx:100782448 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00261 07 2404786 2411897 Adu07g00261 07 2404786 2411897 ECH