Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00247 ATGGAATTCGACCCGATCCCAATCGGTTCCTGCTCCAAAGAGAACCAGATCATCTACCAGCAGTGGTTCAATTACGCCGATTCAGATGGCGATGGCCGCATTACGGGGAGTGATGCCACCAAGTTTTTCGCCATGTCCAATTTGTCTCGTCAGGATCTTAAGCAGGTGTGGGCTATTGCGGATTCGAAGCGACAAGGATATCTTGGTTTTGCAGAGTTCATCATTGCTATGCAGCTAATTTCTTTGGCACAATCTGGCCAACCAATAACACAAGATCTTCTTTCTAGTGATGTTGAGCTGAAAAACTTGAAACCTCCCACAATGGATGGTTTGGATGTATTAATGGCTAAGAAAAGGCATAAAGAAAAAGAAGTTGATTCAAATGTTAGCAATAATGCAGGTAATTCTCCATTGCAGCCATCACCATCTTCAAGTAGTTGGTTCTCTTCTAAGTCAACAAAAAAGGTTTCACTTTCCTCCGTGACCTCAATAATTGATGGCTTGAAGAAACTCTACATCCAGAAGTTGAGGCCATTAGAAGCTACTTATCGTTTTAATGATTTTGTATCCCCATTACTGACAAATAGTGACTTTGAAGCAAAGCCAATGGTTATGCTTTTGGGTCAATACTCAACTGGTAAAACAACATTTATCAAACATCTACTTAAAAGTAGTTATCCAGGAGCCCATATTGGACCAGAGCCTACAACTGATCGGTTTGTTGTTGTCATGTCTGGACCTGACGAGAGAAGCATTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCATTTAGTGGTCTTACAAGTTTTGGCACCGCATTTTTGTCAAAATTTGAGTGCTCTCAAATGCCTCATCCGCTACTGGACCACATTACATTTGTGGACAGTCCTGGAGTTTTATCCGGAGAAAAGCAACGAACACAACGGGCATATGATTTTACAGGTGTAACATCTTGGTTTGCTGCCAAATGTGATTTGATACTCCTCCTGTTTGATCCTCACAAGCTTGATATTAGTGATGAATTCAAGCGTGTGATCTCATCCTTGCGCGGGCATGATGACAAAATTCGAGTAGTTTTGAACAAGGCAGACCAAGTTGATACACAACAACTAATGAGAGTTTATGGAGCATTGATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCATGCGTGTGTATATCGGCTCCTTCAACGATAAACCCATAAATGATGCTGTCAGTGGTCCAATCGGTAAGGAACTCTTTGAAAAAGAACAAGAGGACCTTCTTTCAGACCTAAAAGATATACCAAAGAAGGCCTGTGATCGAAGAATCAACGAATTTGTAAAACGGGCACGAGCTGCCAAGATACATGCTTACATTATCAGTCATCTTAAAAGGGAGATGCCTGCTATGATGGGCAAAGCTAAAGCTCAGCAAAAGCTTATTGATAATCTGGCTGCAGCATTTGGAAAGGTACAAAGGGAGTTTCATCTACCTCCTGGAGACTTCCCAGATGTTGAACATTTCAGAGAGACTCTAAGTGGTTATAATTTTGATAAGTTTGAGAAATTGAAACCAAAAATGATACAGGCAGTAGATGACATGTTAGGTTATGACATTCCAAACCTCTTGAAAAATTTTAGGAATCCGTATGATTAG 1650 0.4115 MEFDPIPIGSCSKENQIIYQQWFNYADSDGDGRITGSDATKFFAMSNLSRQDLKQVWAIADSKRQGYLGFAEFIIAMQLISLAQSGQPITQDLLSSDVELKNLKPPTMDGLDVLMAKKRHKEKEVDSNVSNNAGNSPLQPSPSSSSWFSSKSTKKVSLSSVTSIIDGLKKLYIQKLRPLEATYRFNDFVSPLLTNSDFEAKPMVMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTSFGTAFLSKFECSQMPHPLLDHITFVDSPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINDAVSGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKREMPAMMGKAKAQQKLIDNLAAAFGKVQREFHLPPGDFPDVEHFRETLSGYNFDKFEKLKPKMIQAVDDMLGYDIPNLLKNFRNPYD 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00247 549 CDD EHD 203 447 - -
Adu07g00247 549 Gene3D - 10 108 - -
Adu07g00247 549 Pfam N-terminal EH-domain containing protein 167 199 IPR031692 -
Adu07g00247 549 Gene3D - 168 540 - -
Adu07g00247 549 SUPERFAMILY EF-hand 11 91 IPR011992 -
Adu07g00247 549 Gene3D - 204 432 IPR027417 -
Adu07g00247 549 PANTHER EH DOMAIN 19 547 - -
Adu07g00247 549 ProSiteProfiles EH domain profile. 15 93 IPR000261 GO:0005515
Adu07g00247 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 471 IPR027417 -
Adu07g00247 549 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Adu07g00247 549 MobiDBLite consensus disorder prediction 128 150 - -
Adu07g00247 549 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 198 434 IPR030381 GO:0005525
Adu07g00247 549 MobiDBLite consensus disorder prediction 122 150 - -
Adu07g00247 549 Pfam Cytoskeletal-regulatory complex EF hand 26 80 IPR000261 GO:0005515
Adu07g00247 549 Pfam Domain of unknown function (DUF5600) 439 540 IPR040990 -
Adu07g00247 549 CDD EH 19 85 IPR000261 GO:0005515
Adu07g00247 549 SMART eh_3 8 103 IPR000261 GO:0005515
Adu07g00247 549 Pfam Dynamin family 204 363 IPR045063 -
Adu07g00247 549 SMART efh_1 18 46 IPR002048 GO:0005509
Adu07g00247 549 SMART efh_1 52 80 IPR002048 GO:0005509
Adu07g00247 549 PANTHER CALCIUM-BINDING EF HAND PROTEIN 19 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00247 Adu-Chr7 2277718 2281920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00247 1 549 EF-hand Containing Proteins AT3G20290 82.514 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00247 K12483 - gmx:100804468 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00247 07 2277718 2281920 Adu07g00247 07 2277718 2281920 ECH