Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00244 ATGGAGCTCTGTTCTCGAACCTTAACAACTCTTCTTCATCGCACTTCCCCTTCTTCTTCTTCTCACTCTCTTCTTCGTGCAACTACTTGTAACTATGCAACACCTTCCAAATCCAGCAACTACTTCAACCTCTCATCATCATCATCATCTCATTATCATAATCATCATGTTCTTCACCACTTCCAACAACCACCCTTTCTCTTTCACCATCATCACGGTAGTTTTTCTTCCTTCATTGTTTCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGTGGCTGCTTCTTCCACAGAAGAGAAAATGGACCGTCTTCCGGCAGAGTTGAACGTCACCGAAACACAAGAACCCAATTCCAGAGTTAGACTTCAAGTGGAGGTGCCACCAGTTGTCTGTGAGGATTGTTACAAAAGGGTCATATCTGAGTTTACAAAGCAAGCAAAGGTCCCTGGATTCCGCCCCGGAAAGCCGGTTCCAGAAAGTATTCTTGTCGGTTATGTCGGGCGCAAAAATGTTCAGAAGGCCACAATCGAATCTATATTGAGGAGAACACTTCCACATGCTATGACTTCAGTTACCAGAAAGGCTTTGCCGGACTCTGTGCGTATAGTGACTAAATTTTCTGAGTTGGAGAAAACATATTCTTCTCAAGGGAGTCTTAGATATGATGTCCTTGCTGATATTGTACCTGAAATCAAATGGGTTCCTGATAATGGATACAAGAATCTGAAAATTGTTGTTGAAATAGACAGTGATATTGATGCTCAGAAAGCATCTGAACAAGAATTCAAAAGGCGTCACAAATCCATTGGTGCGCTGAAGGTTGTTGCTGACAGAGGACTACAGGTTGGTGATGTTGTTGTCATTGACATCTCGGCAACAACCATTGACCAAGATGAATCAAAGATTAAAAATATTCCTTCTGCTGAAAGTAAAGGATTTAACTTCGATACAGAAGATGGTTACAGAATATTGCCCGGTTTCCTTGATTCTATAATTGGAATTCGTCCAGGTGAAACAAAGTCATTTCCTCTTGTGTTTCCTGAAACATGGAATCAAGAAAATCTCCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTATTTTACAGAGATTTGCCGGAACTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACCACAGTGCAACAGGTCAGAGACCTATTGTTGCAGAGATGTCAAGAGGTGGAGCAATCAGCTAGAGAACAAGCAACTGATAATGCTATATTAGATCAGATTTCCAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGACAGCTATATGGAGCCAGCCTTTTAGAAATACAGGCGAAAATGAATCTAAATGACCAGCAATTGGCTTCTCTGTCAAGTCAAAAGGCTGTGAATGAATATCTTGAGCATCAGAAGGACAATATAAGAAATTTGATAAAACAGAATCTGGCCGTCGGTGATATATATAGGCGCGAAAATCTGCAGTTCTCCACTGAGGACCTTGTCAAGGAGGTTGAGAATTCCATCACCGAATTCAAACGTCAAAATCAAGAATATGACGAGGAAAGGGTAAAGGATCAGGTCCAAGAAATACTAGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAGTATGTAACCAGATGA 1701 0.4103 MELCSRTLTTLLHRTSPSSSSHSLLRATTCNYATPSKSSNYFNLSSSSSSHYHNHHVLHHFQQPPFLFHHHHGSFSSFIVSASSSSSSSSSSSSSSSSVAASSTEEKMDRLPAELNVTETQEPNSRVRLQVEVPPVVCEDCYKRVISEFTKQAKVPGFRPGKPVPESILVGYVGRKNVQKATIESILRRTLPHAMTSVTRKALPDSVRIVTKFSELEKTYSSQGSLRYDVLADIVPEIKWVPDNGYKNLKIVVEIDSDIDAQKASEQEFKRRHKSIGALKVVADRGLQVGDVVVIDISATTIDQDESKIKNIPSAESKGFNFDTEDGYRILPGFLDSIIGIRPGETKSFPLVFPETWNQENLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVRDLLLQRCQEVEQSAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGASLLEIQAKMNLNDQQLASLSSQKAVNEYLEHQKDNIRNLIKQNLAVGDIYRRENLQFSTEDLVKEVENSITEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYVTR 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00244 566 Hamap Trigger factor [tig]. 115 562 IPR005215 GO:0015031
Adu07g00244 566 MobiDBLite consensus disorder prediction 87 110 - -
Adu07g00244 566 Coils Coil 516 536 - -
Adu07g00244 566 Pfam Bacterial trigger factor protein (TF) C-terminus 398 555 IPR008880 GO:0006457|GO:0015031
Adu07g00244 566 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 384 564 IPR027304 -
Adu07g00244 566 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 105 565 - -
Adu07g00244 566 Gene3D - 113 238 IPR036611 GO:0006457|GO:0015031
Adu07g00244 566 Gene3D - 245 561 IPR037041 GO:0006457|GO:0015031
Adu07g00244 566 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 105 565 IPR005215 GO:0015031
Adu07g00244 566 SUPERFAMILY Trigger factor ribosome-binding domain 115 253 IPR036611 GO:0006457|GO:0015031
Adu07g00244 566 Pfam Bacterial trigger factor protein (TF) 116 255 IPR008881 GO:0006457|GO:0015031
Adu07g00244 566 TIGRFAM tig: trigger factor 126 555 IPR005215 GO:0015031
Adu07g00244 566 Gene3D - 275 382 IPR046357 GO:0003755
Adu07g00244 566 MobiDBLite consensus disorder prediction 87 104 - -
Adu07g00244 566 SUPERFAMILY FKBP-like 281 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00244 Adu-Chr7 2257604 2264238 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00244 K03545 - gmx:100812597 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00244 07 2257604 2264238 Adu07g00244 07 2257604 2264238 ECH