Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00228 ATGAAAAAGGGTAAGGTGGTACGTTCAGATGACGAGGCTGAGGGTGACACCGAGCTTAACTCTGTGTCTAATTACCATCTTGAAGATGAAGATTCTGAGCCAGTTTCTTTTGCTGCATTGCCAATTCAATGGGGTAATAAAGCTGTCAAGAATTCTGGTCGAACTGAAGAGAGGGTGTTCCTACATGGCTCTACGGATGAGGGGCTGAAGGCAGTTATGGTGCAGGTCACAGCATGGAGATTTGATCTTTCTAGAGCGAAACCTGTGATATCATTGCTATTATCAAAAGAGAAAAGGTGGATTGAGCTGAAGAAGCCAAGGAATAGCTATCTTGATACTATAAGGACCATTCTGATCACCGTTCACTTCCTGCATCTAGTAAAGAGAAATCCCAAGACATCAGCCAATTCTGTCTGGGGTAACATGTTTAAGAATAGGGAATTTAGCTTATCTAAGTCTAAGCCTTCAGAAAAAGATTTGCTGGACCATATGCATTTAATTGATGAAGCTGCCAAAAGAGATGGTGTCTTAGCTAAGTCCCAGCTTTTGCTCACCGTTTTGAAGGCGAAAGTGGGGAATAAAAATCTTTCTAGCAAGGAAGCTAAAGATTTGGTACAGCCTGCATCTATACTTGATGATATTGACAAGGGCGTAAATAAAGCTAGTGAAGAGTCTGAAGAAGAGGATGATTCGTCTCATGAAGTTTGTGTGATTTGTGATGATGGTGGTAATCTTACATGTTGTGAAGGACCATGCATGAGATCATTTCATGCGAGAAAGATGGATGGTAAAGAATCTAAGTGTGCTTCTCTTGGTTTCGCTCAGAAGGAGCGGATCCCGAGCTTTTATTGTAAGAACTGTTTATATAATCAGCATCAGTGCTTTGCATGTGGCGAGCTGGGATCGTCTGATAAAGTTAAGGGTGCTGAGGTCATTAAATGTGCTTCTGCAACCTGTGAATACTTCTATCATCCACATTGTGTTGCCAAGTTACTTTCCCAGATAAATAATCATGATGCAGAGGAGCTTGAGAGAAACATTTCGGGCGCAAATTCTTTCACCTGTCCCGTTCATTATTGCTGTGTCTGTAAAGAAGTTGAAAATGTAATGAAACCTGAGCTGCAATTGGCTGTTTGTAGACGTTGTCCAAAATCATATCACCGCAAATGTTTGCCAAGAGAGATTGCTTTTGAGGATGATGATGATGATGATGTTATCACAAGGGCTTGGGAAGGTCTTTTGCCAAACAAACGCATTCTTATTTATTGCCTGAATCATGATATTGATGAAATATTAGGGACCCCTCTAAGAGATCATATAAAATTCCCCGATGAAGAAGATACTGTCCAAGAAATTAATAACAATAATGGGAAGATGAAGCCTGCAACCAAAGAGGGAGTTAGGCCAAATAAGAAAAATGGTGATGTAGATAATGGAAAATCCAGTTGTTCGACGGAAAATGTCAACAGATCTAAAGTGACTGTAAAGCTGTCTCCTGGAGAAGTTGGTAGCAAGAAGAGTCCTGAAAAGACGAGTTCTGGTTCAAATATTGCAAAGAAACCAGAAGCTAATAGAAAATCCGGTTGTTTGACCAAGGATACTACTGGATCTAAAGCGACTCCAAAGCGCTCTGCTGGGAAAGGTGGTGGCAAGAACAATACTGGAAAGAAGACTTCCCATTCAAATATTACAAAGCAACCAAAAGCTAATGGAAAGCCATCTCCTGGGGAAGTTTTTGCAAAGAACAGTTCTGAAAAGGCAATCTCTGGTTCGACTATTGCGAAGCAACCAAAAGCTAATGGAAAATCCGGTTCTGGTTTGACTGAAAATAGCGCAACGATTTCAAAGAAATCTGAAATGTCCGAGGATAGCCAGCCCATACGAGCTCTTTTGGTGAAGGATTCCAAGCAAACTAATGCAGTTAGTAAGGGAAAGCCACCCCTACTGTCCCTTTTGAAACACAAGGCTATAGCCAAGGAGCTACGTGAGCAGCAATCTGGCCAACATCGAGTTGTAGAGATGGAAAGCCCCAATGCTGAATGTTTGCCTGCTGATGTGAATACGGATGATAATTGTGGGGACAACATCATGCCAAGCCAAGAACCCCCAAAGTCACCTGATGGTGAAAAAGACCAAGCATCCGTGAATGGACACAGGAAAAGAAGCTCACATCATTTTAAGGATGACCAAGATAACCAAGAGGGACCTGAATGTAAGAAGAGCAAGCCTGAGAAGACATCGTCAACCAAAAGGAAACACAGCGACGAAAATGATGGAAGTGGCGTCAGTGTGGTCTCATCAGCCAAAAGGCAGACTGTAGAGGAGCTACATAGGGAGGAGGAGGATCAGTGCCAGATAGAGTCAAATACAAGGCAAAGTGTTGGCAACATGGCATATAATTATGCCAGACCAGTTTCAGCATTTGAGTCATCTTATAAAGCGACTCCTGCAGATGTTGATGAGGAAAATAGGATATCCGTGCTTTATGGTTTTGCAGCTGGTCCTAACGTTGAATATGCCAGCACGCATTCAGCAGGTTGGATTGATGATGATGATGATGATGATGATGATGATGATGATGAGTAG 2586 0.4207 MKKGKVVRSDDEAEGDTELNSVSNYHLEDEDSEPVSFAALPIQWGNKAVKNSGRTEERVFLHGSTDEGLKAVMVQVTAWRFDLSRAKPVISLLLSKEKRWIELKKPRNSYLDTIRTILITVHFLHLVKRNPKTSANSVWGNMFKNREFSLSKSKPSEKDLLDHMHLIDEAAKRDGVLAKSQLLLTVLKAKVGNKNLSSKEAKDLVQPASILDDIDKGVNKASEESEEEDDSSHEVCVICDDGGNLTCCEGPCMRSFHARKMDGKESKCASLGFAQKERIPSFYCKNCLYNQHQCFACGELGSSDKVKGAEVIKCASATCEYFYHPHCVAKLLSQINNHDAEELERNISGANSFTCPVHYCCVCKEVENVMKPELQLAVCRRCPKSYHRKCLPREIAFEDDDDDDVITRAWEGLLPNKRILIYCLNHDIDEILGTPLRDHIKFPDEEDTVQEINNNNGKMKPATKEGVRPNKKNGDVDNGKSSCSTENVNRSKVTVKLSPGEVGSKKSPEKTSSGSNIAKKPEANRKSGCLTKDTTGSKATPKRSAGKGGGKNNTGKKTSHSNITKQPKANGKPSPGEVFAKNSSEKAISGSTIAKQPKANGKSGSGLTENSATISKKSEMSEDSQPIRALLVKDSKQTNAVSKGKPPLLSLLKHKAIAKELREQQSGQHRVVEMESPNAECLPADVNTDDNCGDNIMPSQEPPKSPDGEKDQASVNGHRKRSSHHFKDDQDNQEGPECKKSKPEKTSSTKRKHSDENDGSGVSVVSSAKRQTVEELHREEEDQCQIESNTRQSVGNMAYNYARPVSAFESSYKATPADVDEENRISVLYGFAAGPNVEYASTHSAGWIDDDDDDDDDDDDE 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00228 861 SMART PHD_3 235 288 IPR001965 -
Adu07g00228 861 SMART PHD_3 360 427 IPR001965 -
Adu07g00228 861 SMART PHD_3 293 359 IPR001965 -
Adu07g00228 861 MobiDBLite consensus disorder prediction 1 15 - -
Adu07g00228 861 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 375 IPR013083 -
Adu07g00228 861 MobiDBLite consensus disorder prediction 584 620 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 451 795 - -
Adu07g00228 861 SUPERFAMILY FYVE/PHD zinc finger 349 394 IPR011011 -
Adu07g00228 861 MobiDBLite consensus disorder prediction 551 569 - -
Adu07g00228 861 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 9 541 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 1 28 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 476 494 - -
Adu07g00228 861 PANTHER ENHANCED DOWNY MILDEW PROTEIN 9 541 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 839 861 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 771 786 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 655 669 - -
Adu07g00228 861 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 231 290 IPR013083 -
Adu07g00228 861 MobiDBLite consensus disorder prediction 704 758 - -
Adu07g00228 861 CDD PHD2_NSD 293 358 - -
Adu07g00228 861 MobiDBLite consensus disorder prediction 505 520 - -
Adu07g00228 861 Pfam Cytosine specific DNA methyltransferase replication foci domain 18 134 IPR022702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00228 Adu-Chr7 2182260 2187068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00228 - - adu:107496360 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00228 07 2182260 2187068 Adu07g00228 07 2182260 2187068 ECH