Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00173 ATGGAGGGAAAGTGGATGAGTTCCCAATCACAGTCAACGAACTTCCACTTACTCGCCAAGATCAAAGAGTTCACTCGATCTATCGTCACTGACCTCAGCAACGGTCAATCGCCGGTCATCCTCATCCACCGGTTCAGGAATCACTGCACTAGTCCCAATTCCAATTGCTTTTGTGGCTTCAATCTACCATGCGGGAAGGATGTTCTCACTCTCTGCAGGGAATCGCACGTACACAGAATAGATGTGATGTTGAGAGTGCTACTCATTGTTCAGAAACTTTTGCAAGAGAACAGGCATTGTTCCAAGAGGGATATTTATTACATGCATCCTTCTGTGTTTTCAGATCAGTCAGTTGTAGACCATGCAATTAATGATATATGTGTCCTTATGCAGTGCAGTCGCCATAACCTTAATGTGGTAAACTTTTTGTTAGTTATGGGATGGATAAGATTCTTTGAAGGAAAAAGGCTGTTTGACTGCATCAGTTCTCCGAACAAGGTCCACCCTATTCCTGTTCATGTTGAAGAAGTTAAAGATATCATTAGTGTTGCTCACTACATATTAGTCGTTGAGAAAGAATCAGTTTTCGAAAGACTAGCAAATGACCAGTTCTGCAGTGCAAACCACTGCATTGTGATCACTGGAAGAGGCTACCCGGATATTCCTACAAGAAGGTTTCTGCGTCTTCTAGTTGAGGATTTGCACCTGCCTGCATATTGCTTGGTCGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCCATGCAAATGGCTTATGACACAAAACATCTTCGTGTCCCGGAGATACAATGGCTTGGAGCTTATCCTTCAGATGCTGAGAGATATTTTATTCCAAAGCAGTGTCTACTTTCTCTAACTGCTGAAGACAAGAGGAAACTTGAAGCCATGTTGCTTAGATGCTACCTGCAAAGGGATGTGCCACAATGGAGGTTGGAGCTAAAGATGATGCTGGAGAAAGGAGTGAAGTTTGAGATTGAAGCATTATCTGTGCATGCTCTTTCATTCTTGTCAATGTCTTACCTGCCATCTAAAATTCAAGGCAATATGGAGAACTCTCTTGCTGAAATGATTTGTGTTCTAAAAATAAATACACAATGTGATGGATGTAAAATGAAGGTGATGCAAGTCTTGAGGAACATCAATGGGGTGTACAACATCACCATTGATGGAGAACGAGGAACGGTGAGAGTTACTGGCAGAGTGAATCCAAGTACAATATTAGGGTTACTAGAGAAATATGGTAAACATGCTGAAGTCAAATATATAAAGTTTGATGGTGAAGTTTTAGATAGAAGAACTCTTCCTTATTATTATGGAGGAAGAGGTGGTAATGGTGGTGGTGATTTTTATGCTCCCTATTCTATGGGATCATCATATCCTCCACATTTATGTTACCAAGCAAGTCTACCTCTGCCATTGCCGCCGCCGCTGCCACCACCACAATACCATCCTCAATTAGTACCATTATACCCTCCTCCGCCAGCACCGGTTTGGCCGCGGCCTTATGGACCTCCTCCTTTAACATCTTATTGGCCGCCGCCGCCGCCGCTGCCGCCTTTTTGCCCTAGGCCAAATAAAATGGCAACAGAAGATTCTTGTGCAATAATGTAG 1647 0.4293 MEGKWMSSQSQSTNFHLLAKIKEFTRSIVTDLSNGQSPVILIHRFRNHCTSPNSNCFCGFNLPCGKDVLTLCRESHVHRIDVMLRVLLIVQKLLQENRHCSKRDIYYMHPSVFSDQSVVDHAINDICVLMQCSRHNLNVVNFLLVMGWIRFFEGKRLFDCISSPNKVHPIPVHVEEVKDIISVAHYILVVEKESVFERLANDQFCSANHCIVITGRGYPDIPTRRFLRLLVEDLHLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAYPSDAERYFIPKQCLLSLTAEDKRKLEAMLLRCYLQRDVPQWRLELKMMLEKGVKFEIEALSVHALSFLSMSYLPSKIQGNMENSLAEMICVLKINTQCDGCKMKVMQVLRNINGVYNITIDGERGTVRVTGRVNPSTILGLLEKYGKHAEVKYIKFDGEVLDRRTLPYYYGGRGGNGGGDFYAPYSMGSSYPPHLCYQASLPLPLPPPLPPPQYHPQLVPLYPPPPAPVWPRPYGPPPLTSYWPPPPPLPPFCPRPNKMATEDSCAIM 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00173 548 Gene3D - 2 141 IPR036388 -
Adu07g00173 548 CDD HMA 378 430 IPR006121 GO:0046872
Adu07g00173 548 Gene3D - 366 431 - -
Adu07g00173 548 PRINTS DNA topoisomerase VI subunit A family signature 116 133 IPR002815 GO:0003677|GO:0003918|GO:0005694
Adu07g00173 548 PRINTS DNA topoisomerase VI subunit A family signature 102 113 IPR002815 GO:0003677|GO:0003918|GO:0005694
Adu07g00173 548 PRINTS DNA topoisomerase VI subunit A family signature 243 259 IPR002815 GO:0003677|GO:0003918|GO:0005694
Adu07g00173 548 PRINTS DNA topoisomerase VI subunit A family signature 187 204 IPR002815 GO:0003677|GO:0003918|GO:0005694
Adu07g00173 548 PRINTS DNA topoisomerase VI subunit A family signature 211 232 IPR002815 GO:0003677|GO:0003918|GO:0005694
Adu07g00173 548 Pfam Heavy-metal-associated domain 373 428 IPR006121 GO:0046872
Adu07g00173 548 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 9 360 IPR002815 GO:0003677|GO:0003918|GO:0005694
Adu07g00173 548 SUPERFAMILY HMA, heavy metal-associated domain 369 431 IPR036163 GO:0046872
Adu07g00173 548 Pfam Type IIB DNA topoisomerase 79 139 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Adu07g00173 548 ProSiteProfiles Heavy-metal-associated domain profile. 378 431 IPR006121 GO:0046872
Adu07g00173 548 CDD TOPRIM_TopoIIB_SPO 185 347 IPR034136 -
Adu07g00173 548 Gene3D - 144 361 - -
Adu07g00173 548 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 9 360 - -
Adu07g00173 548 PRINTS SPO11 homologue signature 283 307 IPR013048 GO:0003677|GO:0003918|GO:0042138
Adu07g00173 548 PRINTS SPO11 homologue signature 108 128 IPR013048 GO:0003677|GO:0003918|GO:0042138
Adu07g00173 548 PRINTS SPO11 homologue signature 201 216 IPR013048 GO:0003677|GO:0003918|GO:0042138
Adu07g00173 548 PRINTS SPO11 homologue signature 248 267 IPR013048 GO:0003677|GO:0003918|GO:0042138
Adu07g00173 548 PRINTS SPO11 homologue signature 344 363 IPR013048 GO:0003677|GO:0003918|GO:0042138
Adu07g00173 548 SUPERFAMILY DNA topoisomerase IV, alpha subunit 77 358 IPR036078 GO:0003677|GO:0005694
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00173 Adu-Chr7 1567197 1572782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00173 K10878 - gmx:100813920 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00173 07 1567197 1572782 Adu07g00173 07 1567197 1572782 ECH