Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00170 ATGGGGCGGGTTGGAGCCACAAGCGCCGTTGGCTTCGGTGGCGCCATTTTGGTGTGCGTAGCTTTTGCCTACTTCATCTCCGACCGTCGTTGGAAGAAGAAGAAGAAACCGATTACGAAGAAAACCAGAGGAGGAGTGGTTGATGCCATTGGCAACACTCCTTTGATTCGAATCAACAGCCTCTCCGATGCTACTAACTGCCAAATTCTTGCCAAGTGCGAGTTCCTTAACCCTGGTGGCAGCGTCAAAGATCGCGTTGCTCTTCAAATTATCCAAGAGGCCTTGGAATCTGGCCAGCTAAGTCCAGGTGGAATAATCACTGAAGGGAGTGCTGGTAGCACTGCCATTAGCATCGCAACGGTTGCTCCTGCATTTGGATGCCAATGCCACGTTGTTATACCCGATGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCCCTTGGGGCAACTGTTGAAAGAGTAAGACCAGTGTCAATTACTCACAAAGATCATTTTGTCAATATTGCAAGGAGAAGGGCATCTGAAGCAAATGAGTTCGCATCAAAGCTCAGAAATTCACAATTGAATGGCAAGGACACAGACCAGATAAACGGTCACAAATCCAATGGTTATGATCACGATTCACTCTTCCCTACTGATTGTAAAGGGCCTGAGATTTGGGAACAAACCAATGGAAATTTGGATGCATTTGTTGCAGCAGCAGGCACTGGTGGCACTGTGGCTGGTATTAGCAGTTTTCTTCAGGAAAAGAATCCAGGGATCAAGTGCTTCCTTATAGATCCTCCTGGTTCCGGTTTGTATAACAAGGTAACAAGGGGAGTTATGTATACAAAAGAGGAGGCAGAAGGACGAAGACTTAAGAATCCATTTGACACCATAACAGAAGGAATCGGAATTAACAGGATAACAAGGAATTTTGCAAAGGCAAAGCTTGATGGCGCATTTCGAGGCACAGATCTTGAGGCTGTTGAAATGGCTAGGTTCCTCTTGAAGAATGATGGGCTCTTCTTAGGAAGCTCTTCAGCAATGAATTGTGTAGGAGCAGTTAGAGTAGCGCAGGCATTGGGCCCTGGTCACACAATTGTGACAATCCTCTGTGACAGTGGAATGCGACACCTGAGCAAGTTCCACAACGACGAATACTTGTCTCAGCTTGGATTGATGCCAAAAGCAACTGGATTGGAGTTCTTGGGCATCAAATGA 1206 0.4627 MGRVGATSAVGFGGAILVCVAFAYFISDRRWKKKKKPITKKTRGGVVDAIGNTPLIRINSLSDATNCQILAKCEFLNPGGSVKDRVALQIIQEALESGQLSPGGIITEGSAGSTAISIATVAPAFGCQCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANEFASKLRNSQLNGKDTDQINGHKSNGYDHDSLFPTDCKGPEIWEQTNGNLDAFVAAAGTGGTVAGISSFLQEKNPGIKCFLIDPPGSGLYNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITRNFAKAKLDGAFRGTDLEAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQALGPGHTIVTILCDSGMRHLSKFHNDEYLSQLGLMPKATGLEFLGIK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00170 401 Gene3D - 50 374 IPR036052 -
Adu07g00170 401 CDD CBS_like 51 375 - -
Adu07g00170 401 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 72 90 IPR001216 GO:0006535
Adu07g00170 401 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 31 382 IPR036052 -
Adu07g00170 401 Gene3D - 80 202 IPR036052 -
Adu07g00170 401 PANTHER CYSTATHIONINE BETA-SYNTHASE 30 400 - -
Adu07g00170 401 PANTHER CYSTEINE SYNTHASE-RELATED 30 400 - -
Adu07g00170 401 Pfam Pyridoxal-phosphate dependent enzyme 48 368 IPR001926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00170 Adu-Chr7 1556773 1558753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00170 50 375 Miscellaneous Gene Families AT3G04940 30.793 6.64e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00170 K01738 - gmx:100799081 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00170 07 1556773 1558753 Adu07g00170 07 1556773 1558753 ECH