Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00158 ATGGCGCAAGTGCTGTACCTGCGGTTGTGTGGTTCCAGTCGCTTGCTCAAAACCCAGAAGCTGAATTCAGAGGTTTCTCCTCACAGAGCTGTCTCAGCTGTGAGATTGATGAGGATAGAGCTTGGTGGTGCTTTTGCTGACCTTCTCAATGAGAAAGGCAAAGGTTCTGGCGAGAATGAGATGGGATATGTCCAGAGAACGCTCGGCTTTCGAACCCGGGAATTGAATCATCATGATCTTAGATTGGTTACTGACATTGTTGGCGGCACAATTCGTTGGAGAAGATATCTTGATCATCTGATCAGTTCAGTTTGTCATGATAAAGATATATCTAGTATGGAACCTCTTCTCTTACAGATTCTAAGAATAGGATTCTATGAGATTGTCAAATTAGATATGCCGCCATATGCTGTTGTAGATGAGAATGTTAGGCTTGCCAAAGTTGCGCTTAGACCTGGTGCCGGCAACATGGTCAACGGAATCCTCCGAAAGCTAGTTGCACTCAAGGAAGATGAGGTTCTTCCTTTGCCCAGAGTGGAGGGTGATGATCGTGCCCAAGCCCGTGCTTTAGCAACTCTATACTCACACCCAGTTTGGATGGTAAGGAGATGGACAAAGTATCTTGGCCAGGAAGAAACCATTAAATTGATGAAATGGAACAACAGTGAACCTAGTTTCAGCTTAAGGCAAGGAAATATAGCAAACCAGGCAAGAGGTTTTTCGAGAGATGACCTTGTGATGCAGCTTAATGCATTGAAGGTAGTCCCATACAGCGTTTCACCACATTTGGATGAATTTGTTCGCGTCAAAACCGGATTGCAGACTGTAATTCATGCCGGATTACTCAGAAAAGGCTTATGTTCAGTTCAAGATGAAAGTGCAGGTCTGGTTCTCATCTTTTCATGTAGCCGACTCTACTTAGTGAGGGATGAAACTCACAGATTGATGATTTCAGGTCTGGTAGTCTCTATTGTGGATCCTCAACCGGGTGAAACTGTGATTGATTGCTGTGCTGCTCCTGGTGGAAAGACCTTATACATGGCCTCTCGTTTATGTGGCCAAGGTTTGGTATTTGCAGTTGATGTAAATCGTGGCAGATTGAGGATTCTCAAAGAGACAGCAAAGTTGCACCAAGTAGACGGCGTTGTTACCACCGTCCACGCCGATCTTCGCGTGTTAACGGATGGTGAAGCGCTAAAGAGTAACAAAGTTTTGTTGGATGCTCCATGCTCTGGGCTTGGTGTTCTTTCGAAGAGAGCAGATTTGCGATGGAACCGGAAGCTGGAAGATATGGAAGACCTGAAGAAATTACAGGACGAGCTCCTCGATGCGGCGGCCAAATTGGTAAAACCTGGTGGAGTGTTAGTTTATAGTACATGCTCCATAGATCCTGAAGAGAATGAGGAGAGGGTAGCAGCATTTCTTCAAAGACATGCGGAATTTCGCATTGATCCTGTAGACAGATTTGTTCCACCTGATTTTGTGACGGACGGTGGTTTCTATTTTTCTAACCCGGTAAAGCATTCGCTCGATGGCTCCTTTGCGGCTCGATTGGTGCGCGCTTCCTAA 1569 0.4557 MAQVLYLRLCGSSRLLKTQKLNSEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTLGFRTRELNHHDLRLVTDIVGGTIRWRRYLDHLISSVCHDKDISSMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVALKEDEVLPLPRVEGDDRAQARALATLYSHPVWMVRRWTKYLGQEETIKLMKWNNSEPSFSLRQGNIANQARGFSRDDLVMQLNALKVVPYSVSPHLDEFVRVKTGLQTVIHAGLLRKGLCSVQDESAGLVLIFSCSRLYLVRDETHRLMISGLVVSIVDPQPGETVIDCCAAPGGKTLYMASRLCGQGLVFAVDVNRGRLRILKETAKLHQVDGVVTTVHADLRVLTDGEALKSNKVLLDAPCSGLGVLSKRADLRWNRKLEDMEDLKKLQDELLDAAAKLVKPGGVLVYSTCSIDPEENEERVAAFLQRHAEFRIDPVDRFVPPDFVTDGGFYFSNPVKHSLDGSFAARLVRAS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00158 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 188 520 IPR029063 -
Adu07g00158 522 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 235 521 IPR001678 GO:0008168
Adu07g00158 522 Gene3D - 44 176 IPR035926 -
Adu07g00158 522 PRINTS RNA (C5-cytosine) methyltransferase signature 281 295 IPR023267 GO:0001510
Adu07g00158 522 PRINTS RNA (C5-cytosine) methyltransferase signature 334 344 IPR023267 GO:0001510
Adu07g00158 522 PRINTS RNA (C5-cytosine) methyltransferase signature 503 520 IPR023267 GO:0001510
Adu07g00158 522 PRINTS RNA (C5-cytosine) methyltransferase signature 402 414 IPR023267 GO:0001510
Adu07g00158 522 PRINTS RNA (C5-cytosine) methyltransferase signature 452 468 IPR023267 GO:0001510
Adu07g00158 522 PANTHER NOL1/NOP2/SUN FAMILY PROTEIN / ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN 13 298 - -
Adu07g00158 522 Pfam 16S rRNA methyltransferase RsmB/F 324 518 IPR001678 GO:0008168
Adu07g00158 522 Gene3D Vaccinia Virus protein VP39 319 522 IPR029063 -
Adu07g00158 522 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 318 521 IPR023267 GO:0001510
Adu07g00158 522 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 13 298 IPR023267 GO:0001510
Adu07g00158 522 Pfam NusB family 60 166 IPR006027 GO:0003723|GO:0006355
Adu07g00158 522 SUPERFAMILY NusB-like 65 200 IPR035926 -
Adu07g00158 522 CDD AdoMet_MTases 332 458 - -
Adu07g00158 522 PRINTS Viridiplantae FMU-related RCMT signature 34 57 IPR023268 -
Adu07g00158 522 PRINTS Viridiplantae FMU-related RCMT signature 58 74 IPR023268 -
Adu07g00158 522 PRINTS Viridiplantae FMU-related RCMT signature 173 186 IPR023268 -
Adu07g00158 522 PANTHER NOL1/NOP2/SUN FAMILY PROTEIN / ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN 318 521 - -
Adu07g00158 522 Gene3D Sun protein; domain 3 183 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00158 Adu-Chr7 1466887 1472132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00158 K03500 - gmx:100779327 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00158 07 1466887 1472132 Adu07g00158 07 1466887 1472132 ECH