Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00157 ATGTCGCAGGAAAAGGGTCAGCCACTACCTAAGTTTGGTGAATGGGATGTTAATGATCCAGCTTCAGCGGAAGGGTACACTGTAATCTTTAACAAAGCTAGGGATGAGAAGAAGACTGGTGGCAAACCTGAGTCACCCGGAAAAGCTGATCCTCATACTGCCAAGCCTGCATTAGATCCCGGCAAAACTGCGAGTAAGAAATGGTTTTGCTGCATACAAAATCCTCCTGCAGAATCATAG 240 0.4625 MSQEKGQPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPESPGKADPHTAKPALDPGKTASKKWFCCIQNPPAES 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00157 79 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 4 39 IPR008700 -
Adu07g00157 79 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED 1 68 - -
Adu07g00157 79 MobiDBLite consensus disorder prediction 30 49 - -
Adu07g00157 79 MobiDBLite consensus disorder prediction 30 66 - -
Adu07g00157 79 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 68 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00157 Adu-Chr7 1463385 1465251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00157 - - gmx:100305826 139.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00157 07 1463385 1465251 Adu07g00157 07 1463385 1465251 ECH