Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00117 ATGGTTGATGAATTCATGGAGCAATTTCCCTTGATTCATCAAAGCTGTTCTTCTTCATCTTCAGGCAATAACGTGACAAGAGAGCCTCCTAAGAGAATTGGTAACGTATGGAGTGCAATAGCGCACATAATAACAGGAGTGATAGGGGCAGGGGTGCTGTCTCTAGCATGGTCGGTGGCGCAACTTGGTTGGATTGGAGGTCCGATTTGCATTGTGTTATTTGCAGGCACAACCATGGTTTCTTCAACCCTTCTTAGTGACTGCTATAGACACCCTCATCCTGAGTATGGTGCAACCAGGAGTTCCTGCTTCATAGATGCAGTCAAATTATTTTTAGGAGAGAAGAAGAAACATGTGTGTGGAATCATGGCTTATGCAACCATGTTTGGCATTACAACTGCCTTTGTTATTACATCTGCTACCAGTGTCAAGGCTATTCTGAAATCAAATTGTTACCACAAAGAAGGGCATAAAGCTCCATGTAAATATGGGGATACATTGTATATGATGCTATTTGGAGTTGTTCAGATTGTGATGTCATTCATACCTGATCTTCACAACATGGCATGGGTTTCAGTTGTTGCTGCCTTAATGTCCTTCACATATGCTACTATAGGACTTGGACTTGGCATCACAACAGTCATAGAAAATGGAAGAATTATGGGAAGTATAACAGGAGTAGCAGCTTCAAGTACTGCTGACAAATTGTGGTTAATCTTCCAAGCACTTTCTGATATTGCTTTTGCCTATCCATACTCAATCATACTCCTTGAGATACAGGACACTCTAGAGGCTCCTCCATCTGAGAACAAGACCATGAAGAAGGCCTCCATGATTGCCATATTCATCACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAGATCAAACACCAGGAAATCTCTTAACTGGCTTTGGTTTCTATGAGCCTTATTGGCTCATTGACTTTGCCAATGCTTGCATTGTTCTTCATTTGATTGGAGGATATCAGATTTATTGTCAACCAATATACAATGCTGTTGATAGATGGTGCCAAAGAAAATACCCAAACAGTGAGTTTGTGAATAAATTCTACAGAATGAAGCTACCAAAGTTACCAGCATTTCAAGTGAATCTATTCAGAATATGTTTCAGAACAACCTATGTTGTTTCCACAACTGGACTTGGAATATTATTCCCTTACTTCAACCAAGTTCTTGGAGTGTTAGGGGCAATAAGCTTTTGGCCATTGGCAATATATTTTCCAGCGAAAAAAAGTAGCCCAAAAAAGAAGGCCCAAAAAAAGCCTTGTAAGGATTTGTTGTTGCGCGAGCTGAGTTGCAGCTTCACTCACAAAAGCCACCTGCAGCCTGCAGCCACCTCACTCCGGCGACCTGAAACAAAATTCCAAACCATAAATATTTCAATTTTTAAAAAAGAGGCCACAACCTATGCTTCCTCCGCCGGAGCCGCCACTGCTTCCGGCGACAAACCCCGCAACCCTCTTGAGGAGTTCTTCGAGGTTGACAGGGACATGGAAAGTGATAAACCTATTGTATATGGTCGGGGTTGGAAGGCCTCCGAACTGCGTTTGAAGTCTTGGGATGATCTTCATAAGTTATGGTATGTGTTGTTGAAGGAGAAAAACATGCTCATGACTCAACGCCAGATGCTCAATTCCCAGAACCTACGATTTCCTAACCCAGAACGCATCCCCAAGGTACGGAAGTCAATGTGCCGCATCAAGCAAGTACTTACAGAGAGAGCAATAGACGAACCGGATCCCAGGAGGTCTGCTGAGATGAAGAGAATGATAAATGCTCTCTGA 1824 0.4265 MVDEFMEQFPLIHQSCSSSSSGNNVTREPPKRIGNVWSAIAHIITGVIGAGVLSLAWSVAQLGWIGGPICIVLFAGTTMVSSTLLSDCYRHPHPEYGATRSSCFIDAVKLFLGEKKKHVCGIMAYATMFGITTAFVITSATSVKAILKSNCYHKEGHKAPCKYGDTLYMMLFGVVQIVMSFIPDLHNMAWVSVVAALMSFTYATIGLGLGITTVIENGRIMGSITGVAASSTADKLWLIFQALSDIAFAYPYSIILLEIQDTLEAPPSENKTMKKASMIAIFITTFFYLCCGCFGYAAFGDQTPGNLLTGFGFYEPYWLIDFANACIVLHLIGGYQIYCQPIYNAVDRWCQRKYPNSEFVNKFYRMKLPKLPAFQVNLFRICFRTTYVVSTTGLGILFPYFNQVLGVLGAISFWPLAIYFPAKKSSPKKKAQKKPCKDLLLRELSCSFTHKSHLQPAATSLRRPETKFQTINISIFKKEATTYASSAGAATASGDKPRNPLEEFFEVDRDMESDKPIVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNSQNLRFPNPERIPKVRKSMCRIKQVLTERAIDEPDPRRSAEMKRMINAL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00117 607 Pfam Transmembrane amino acid transporter protein 34 422 IPR013057 -
Adu07g00117 607 Pfam Mitochondrial 39-S ribosomal protein L47 (MRP-L47) 501 587 IPR010729 GO:0003735|GO:0005761|GO:0006412
Adu07g00117 607 CDD Ribosomal_L29_HIP 526 587 - -
Adu07g00117 607 SUPERFAMILY Ribosomal protein L29 (L29p) 523 590 IPR036049 GO:0003735|GO:0005840|GO:0006412
Adu07g00117 607 PANTHER OS05G0424000 PROTEIN-RELATED 16 445 - -
Adu07g00117 607 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 16 445 - -
Adu07g00117 607 Gene3D - 495 595 IPR038340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00117 Adu-Chr7 1097633 1108930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00117 31 445 Organic Solute Cotransporters AT1G77380 50.600 5.04e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00117 K24917 - gmx:100781771 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu07g00117 07 1097633 1108930 Adu07g00117 07 1097633 1108930 ECH
Adu07g00117 07 1097633 1108930 Adu01g00339 01 4407704 4411709 PCT