Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03052 ATGGCTTCTTCTTCTTCCGCGCCTACAACTCCTTCTCCCTCCTTCACCGCTCGCATTCCTCTTCCTCCTTCAGGTGACAGCCCTCCTAATGTTGAATCTAATTCAGCTCTGGTTCCTATCCATATTGTGACAACTGCATCTCAACTCCCAGCTGAGTTTCTGGAACCATCGCCTCAGGACCAGTTCATAATTGGTTTTGATTGTGAGGGCGAAGACTTGTGTCGAACTGGAGCTCTCTGTCTAATACAGCTTGCATTCCCAGATGCCATTTACTTGGTTGACGCAATAGAAGGTGGGGAAGCGCTGATCAAAGCCTGTAAGCCTGCGCTCGAGTCTAATTTCATCACAAAAGTGATTCATGATTGCAAAAGGGATAGTGAGGCATTGTACTTCCAGTTTGACATCAAGCTGAACAACGTGATGGATACCCAGATTGCATATGCACTGATCGACGAGCAAGAAGGGAAGCGGAAAAGAGATGACAACATTTCTTTTGTTGACCTCCTAGCTGATCCACGTTTTTGTGGCATATCATATGATGAGAAGGAAGAGGTTCGGGTTCTCCTTCGACAGGACCCCAAGTTTTGGAGATATAGACCTTTTTCTGAACGTATGGTCCGCACAGCTACTGATGATGTCCGTTTTCTTCTGTATGTTTATCACCGAATGATGGTGAACTTGAATGAGCGGTCCTTATGGCATCTTGCGGTTCGTGGTGCCCTGTATTGCCGATGTTTTTGTGTGAACAATAATGATTATGCTGATTGGCCATCTCTGCCTCCTATCCCAGATACGCTGAAAGTTGATGGAAATGATCTGGAGGAAGAAATTCTTTCAGTTGTAGACATTCCCCGAGGAATGATGGGACGAGTTATTGGTAGAAGGGGGGCTACAATCTTGACAATTAAGGAGGGATGCAATGCGGAAATTGTCATTGGAGGTTCGAAGGGCCCACCTGACAAGGTCTTCATCATTGGACCAGTGAAGCAGGTGTTGAAAGCTGCGGCATTGATTAGGGGTAGAATCATAGATATATAG 1038 0.4586 MASSSSAPTTPSPSFTARIPLPPSGDSPPNVESNSALVPIHIVTTASQLPAEFLEPSPQDQFIIGFDCEGEDLCRTGALCLIQLAFPDAIYLVDAIEGGEALIKACKPALESNFITKVIHDCKRDSEALYFQFDIKLNNVMDTQIAYALIDEQEGKRKRDDNISFVDLLADPRFCGISYDEKEEVRVLLRQDPKFWRYRPFSERMVRTATDDVRFLLYVYHRMMVNLNERSLWHLAVRGALYCRCFCVNNNDYADWPSLPPIPDTLKVDGNDLEEEILSVVDIPRGMMGRVIGRRGATILTIKEGCNAEIVIGGSKGPPDKVFIIGPVKQVLKAAALIRGRIIDI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03052 345 Gene3D - 4 244 IPR036397 GO:0003676
Adu06g03052 345 PANTHER EGALITARIAN, ISOFORM B 17 342 - -
Adu06g03052 345 Pfam 3'-5' exonuclease 41 226 IPR002562 GO:0003676|GO:0006139|GO:0008408
Adu06g03052 345 SMART kh_6 275 343 IPR004087 GO:0003676
Adu06g03052 345 CDD KH-I 281 338 - -
Adu06g03052 345 Gene3D K Homology domain, type 1 269 344 IPR036612 GO:0003723
Adu06g03052 345 PANTHER - 17 342 - -
Adu06g03052 345 SMART 35exoneu6 40 228 IPR002562 GO:0003676|GO:0006139|GO:0008408
Adu06g03052 345 MobiDBLite consensus disorder prediction 1 31 - -
Adu06g03052 345 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 271 342 IPR036612 GO:0003723
Adu06g03052 345 Pfam KH domain 281 339 IPR004088 GO:0003723
Adu06g03052 345 ProSiteProfiles Type-1 KH domain profile. 276 338 - -
Adu06g03052 345 CDD Egl_like_exo 53 247 - -
Adu06g03052 345 SUPERFAMILY Ribonuclease H-like 32 250 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03052 K18740 - gmx:100788577 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03052 06 108539379 108544209 Adu06g03052 06 108539379 108544209 ECH