Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03019 ATGAGTTTCACTTTCATCCAAAAATTCGTTACTGAGTCGACTCGCTTCCCTTACACCTCCGCTTTTGTTCTCGCGTTCATCACTGTCGCAGTAGCTGCCGTCAGATTCCGCCGTCTGTCCAAACCGACGTCGTTTACGATGTCTTCTTCATCAGTAAACGACCCTGTTCAGCGCAACCGCATCTTCTCGAGCAAGCTCTACTTCGATGTGCCTCGCTCCAAGGTTCCGATTATCTATTCTGAATCATATGACATATCCTTTCTCGGCATTGAGAAACTGCACCCGTTTGATTCTTCTAAATGGGGGCGAGTTTGTAGATTCCTAGTGTCGTTTGGTGTTCTGGATAAGAAATGCATTGTTGAGCCTCTTGAAGCTTCAAAGGATGATCTTTTAGTGGTAATCACTGTCCCTCCGGTGGGGTTATTTCCTAATTGTCTTGTGCAACAAAAAGTTCTTCATCCATTCCGGAAGCAGGTTGGTGGAACTATTTTGTCTGCAAAACTTGCAAAAGAGAGAGGATGGGCCATTAATGTAGGAGGAGGATTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTTTGTGCTTATGCAGATATTTCTCTTTGCATCCACTTTGCTTTGGTTCGGTTGAATATATCGAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAATGGCCATGAAACAGACTTTGCCTATGATAGCCGAGTCTACATTTTGGACATGTACAACCCTGGAATATACCCTTTGGATTATGAGGCAAGGAACTACATAAATCAGAAAGTTGAAGTGAAGAGTGGGACACTCACGGAAGATTACCTGCAGAAATTAGATGAAGCACTAGAGGTTGCTGGGCGTAGCTTTGACCCTGAGTTGATAGTTTACAATGCCGGAACTGACATCTTAGATGGTGATCCATTAGGAAGGTTAAAGATCAGTCCTGATGGGATTACCCTCAGAGATGAGAAAGTTTTTCGGTTTGCTCGTGAGAAGAACATTCCTATTGTCATGCTCACGTCAGGTGGTTATATGAAATCCAGTGCTAGAGTCATTGCAGATTCAATAGTCAATCTGTCCAAGAAATGCTTGATAGAAGACAAACAGGATTCCTAA 1116 0.4337 MSFTFIQKFVTESTRFPYTSAFVLAFITVAVAAVRFRRLSKPTSFTMSSSSVNDPVQRNRIFSSKLYFDVPRSKVPIIYSESYDISFLGIEKLHPFDSSKWGRVCRFLVSFGVLDKKCIVEPLEASKDDLLVVITVPPVGLFPNCLVQQKVLHPFRKQVGGTILSAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFALVRLNISRVMIIDLDAHQGNGHETDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTLTEDYLQKLDEALEVAGRSFDPELIVYNAGTDILDGDPLGRLKISPDGITLRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLIEDKQDS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03019 371 SUPERFAMILY Arginase/deacetylase 72 359 IPR023696 -
Adu06g03019 371 CDD HDAC_classIV 94 359 IPR044150 GO:0004407|GO:0016575
Adu06g03019 371 Gene3D Histone deacetylase domain 74 370 IPR037138 -
Adu06g03019 371 PRINTS Histone deacetylase superfamily signature 214 229 IPR000286 -
Adu06g03019 371 PRINTS Histone deacetylase superfamily signature 291 301 IPR000286 -
Adu06g03019 371 PRINTS Histone deacetylase superfamily signature 180 203 IPR000286 -
Adu06g03019 371 PANTHER HISTONE DEACETYLASE 11 49 369 - -
Adu06g03019 371 Pfam Histone deacetylase domain 143 357 IPR023801 -
Adu06g03019 371 PANTHER HISTONE DEACETYLASE 11 49 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03019 Adu-Chr6 108240631 108245332 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03019 K11418 - gmx:100781276 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03019 06 108240631 108245332 Adu06g03019 06 108240631 108245332 ECH