Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03011 ATGGAACGTGCAAGGAGGCTCGCAAACCGCGCCATTCTGAAGCGCCTCCTCTCTCAAACAAAACAGCACCGTCGCCACGAGCCTCTCTCCAACTCTTCCTCTTCCTCCCCCGTTCTCTACTCTCCCTCCAGATGCGTCTCCACCGTAACTCCCTCTGTTCTCCGCAACAGAGCATCGTTCCATCATTTCTCTCAACAACAAACTCGCCGAATTTCCGTTACTGCCCTCCAGCCCAGCGACACCTTCCCACGCCGCCACAACTCCGCTACCAAAGAAGAACAGAGCAAGATGGCTCAGTCTTGCGGCTTCGACTCTCTTGATTCCCTCATCGACGCCACCGTTCCCAAATCCATTCGCCTCAACGACTTCGCCTTCTCTAAGTTCGATGCAGGATTGACGGAGGGCCAGATGATTGAACACATGAAGGATTTGGCGTCGAAGAACAAAGTTTTCAAGTCTTTTATTGGAATGGGATATTACAACACTCATGTGCCACCTGTCATCTTGAGGAACATCATGGAGAACCCTGCTTGGTACACGCAGTACACTCCTTACCAGGCTGAGATTTCGCAGGGCCGTCTCGAGTCATTGCTTAATTTCCAGACCATGATCACTGATCTCACTGGCTTGCCTATGTCCAATGCTTCATTGCTTGATGAAGGAACTGCTGCTGCTGAAGCAATGTCTATGTGTAACAACATCCAGAAAGGGAAGAAGAAGACTTTTGTTATTGCAAGTAACTGTCATCCTCAAACAATTGATATATGCAAGACAAGGGCTGCTGGTTTTGATCTTGAGGTTGCCACTGTGGATCTTAAGGATATTGATTACTCAAAAGGTGATGTTTGTGGTGTGCTTGTTCAGTACCCCGGGACTGAGGGTGAGATTCTGGACTATGGGGAGTTTATTAAGAAGGCACATGCTCATGGGGTTAAGGTTGTTATGGCCAGTGATCTCTTGGCACTGACTGTGTTGAAGCCTCCTGGTGAGTTGGGGGCAGATATTGTTGTTGGCTCGGCTCAGAGGTTTGGTGTTCCAATGGGCTATGGAGGGCCCCATGCCGCTTTCTTGGCAACATCACAAGAGTATAAGAGGATGATGCCTGGGAGGATTATTGGTGTCAGTGTTGATTCTTCTGGAAAGTCGGCTTTGAGAATGGCGATGCAAACAAGGGAACAGCATATTCGGAGGGACAAGGCTACTAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAATATGGCTGCTATGTTTGCTGTATATCATGGACCTGAAGGACTTAAGACCATTGCTCAACGCGTTCATGGTCTTGCTGGCGTGTTTGCCCTGGGATTGAAGAAACTTGGAGTAGAAGTTCAGGATCTTCCCTTCTTTGACACTGTGAAGGTTAAGGTTCCCAATGCCCACGCAATCGCTGATGCTGCTGTGGAAAGTGAAATAAACTTGCGAGTTGTAGATGGAAAAACTATAACCGTTGCTTTTGATGAAACAACCTCATTGGAGGATGTTGATACACTTTTCAAAGTCTTTGCTGGTGGCAAGCCAGTTTCCTTCACAGCTGCTTCTCTTGCGCCAGAAGTCGAGTCTGCGATTCCTTCTGGATTAACTAGGGACAGCCCTTATCTGACACACCCTATCTTCAACACGTACCACACTGAGCATGAGTTACTCAGGTACATTCATAGGTTACAATCCAAGGATCTCTCATTATGCCACAGCATGATTCCACTTGGATCTTGTACTATGAAGTTGAATGCAACCACTGAGATGATGCCAGTAACCTGGCCCAGCTTCACTGATATTCACCCTTTTGCACCAACTGAGCAGGCTCAAGGTTATCAGGAAATGTTTGACAATTTGGGTGACTTGCTGTGTACCATCACCGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGAGCTGCAGGAGAATATGCTGGGCTGATGGTTATTCGAGCATATCATTTGGCAAGAGGAGACCACCACCGCAATGTTTGCATTATACCTGTCTCGGCACATGGTACAAATCCTGCCAGTGCTGCCATGTGTGGCATGAAAATTGTATCTGTGGGAACCGATGCCAAGGGTAACATTAACATTGCAGAATTGAGGAAGGCCGCTGAAACTTACAAGGACAACTTATCAGCTCTTATGGTAACATATCCCTCAACCCATGGTGTTTATGAAGAGGGTATAGATGAGATTTGCAAGATTATTCATGATAATGGAGGCCAAGTATACATGGATGGTGCCAACATGAATGCACAGGTGGGTCTTACAAGCCCTGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGTATGGGTCCAATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCTGTGGTACCCACTGGTGGAATTCCCGCCCCGGAGAACTCTCAACCTCTTGGTACCATCTCTGCTGCACCTTGGGGCTCAGCACTCATATTGCCAATCTCCTACACTTACATTGCCATGATGGGTTCGAAAGGACTCACCGATGCATCAAAGATAGCCATTTTGAATGCGAACTACATGGCGAAACGATTGGAGAATCATTACCCTGTTCTTTTCCGTGGAGTCAATGGAACTGTTGCTCATGAATTCATCATTGACTTAAGAGGCTTTAAGAACACTGCTGGAATAGAGCCTGAAGACGTTGCAAAGCGCCTCATGGACTATGGCTTCCATGGACCAACAATGTCATGGCCTGTACCTGGCACACTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCCATCAGAGAAGAAATTGCCGAGATAGAGAAAGGAAAAGCTGACATTAACAACAATGTGCTCAAGGGAGCTCCTCATCCACCATCATTGCTCATGGGAGATGCATGGACCAAACCATACTCCAGGGAATATGCAGCCTTCCCAGCTCCCTGGCTCCGCGTCGCAAAGTTCTGGCCTACAACAGGGCGTGTTGATAATGTGTATGGCGACCGCAACCTCATCTGCACCCTTCTGCCGGCAGCACAGGTCGCCGAAGAACAAGCTGCTGCAACCGCATAG 3126 0.4782 MERARRLANRAILKRLLSQTKQHRRHEPLSNSSSSSPVLYSPSRCVSTVTPSVLRNRASFHHFSQQQTRRISVTALQPSDTFPRRHNSATKEEQSKMAQSCGFDSLDSLIDATVPKSIRLNDFAFSKFDAGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFVIASNCHPQTIDICKTRAAGFDLEVATVDLKDIDYSKGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDKATSNICTAQALLANMAAMFAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGVEVQDLPFFDTVKVKVPNAHAIADAAVESEINLRVVDGKTITVAFDETTSLEDVDTLFKVFAGGKPVSFTAASLAPEVESAIPSGLTRDSPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIAELRKAAETYKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENSQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLENHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYSREYAAFPAPWLRVAKFWPTTGRVDNVYGDRNLICTLLPAAQVAEEQAAATA 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03011 1041 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1041 - -
Adu06g03011 1041 MobiDBLite consensus disorder prediction 16 42 - -
Adu06g03011 1041 TIGRFAM gcvP: glycine dehydrogenase 85 1025 IPR003437 GO:0004375|GO:0006544
Adu06g03011 1041 CDD GDC-P 134 510 IPR020581 GO:0004375|GO:0006546
Adu06g03011 1041 Coils Coil 700 720 - -
Adu06g03011 1041 Gene3D - 165 425 IPR015421 GO:0003824
Adu06g03011 1041 Gene3D - 592 829 IPR015421 GO:0003824
Adu06g03011 1041 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1041 IPR020581 GO:0004375|GO:0006546
Adu06g03011 1041 SUPERFAMILY PLP-dependent transferases 531 1026 IPR015424 -
Adu06g03011 1041 Gene3D Aspartate Aminotransferase, domain 1 154 506 IPR015422 GO:0003824
Adu06g03011 1041 CDD GDC-P 553 948 IPR020581 GO:0004375|GO:0006546
Adu06g03011 1041 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 76 1032 IPR003437 GO:0004375|GO:0006544
Adu06g03011 1041 Pfam Glycine cleavage system P-protein 527 803 IPR020581 GO:0004375|GO:0006546
Adu06g03011 1041 Pfam Glycine cleavage system P-protein 85 510 IPR020581 GO:0004375|GO:0006546
Adu06g03011 1041 Gene3D Aspartate Aminotransferase, domain 1 840 979 IPR015422 GO:0003824
Adu06g03011 1041 SUPERFAMILY PLP-dependent transferases 85 511 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03011 Adu-Chr6 108151462 108158601 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03011 K00281 - gmx:100819714 1862.43