Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03004 ATGGCTTGGAGGCCTTTATTAACGCAGGTTTCAAGGCGACAATTAGAATTTGGACAGGCAAAACATTTGTTTCTTAGAGGCCATTTTTCCATTAATAAGTTCAGAGATTGTGCAGGGAATAGGCTTTTGCCCACCCAGGAGAGATTCAAGTCCAGCTATGTTGGCGATTTCAACCGTCGAATACGTGATGCAGATGAAGCTGTTGAAATTTCTCATCTGAAAGAACTTTACCATCGAAATGAACCTGAAGCTGTAATTAGGTTATTTGAAAGTCAGCCATCTCTGCATGCTAATCCTTCAGCACTTTCCGAATATATTAAAGCATTAGTTAAAGTTGATAGGCTGGATGAAAGTGAATTATTGAAGACATTGAGAAGAGGTATGCCCAATGCAGTGAGGGAGGAAGAAAGCATAGATGGCTTCTCTTCTCTTAGAAATATGCGGGGGCAAGAAAGTATAGGTGGTTTCTCTGCTTTTAGAAATCTGGGAACACCTGCAAGAGAGAGAATTCTTGGGACTGCAAGTTCACCCGTTCATATGGTGGCTACAGAAGCGGCGAGTTTTAAAGATCGACTATGGCGTGCATTTAGGTCCATTGTAGTTGTTTTTTTGTTGATTTCGGGTGCAGGAGCTCTCGTAGAGGATAAAGGAGTTGGTCAAGGGCTTGGTGAACATGAAGGAGTGCTACCCAGCATGGAGTCAAGTACAAGATTTAATGATGTAAAAGGTGTTGACGAGGCAAAGGCAGAGCTGGAAGAAATTGTTCACTACCTCCGGGATCCTAAGCGCTTTACTCGGCTTGGTGGTAAGCTTCCAAAAGGAGTGTTGCTTGTTGGTCCACCTGGAACTGGAAAAACTATGTTGGCTAGAGCTATAGCCGGAGAGGCTGGGGTTCCTTTCTTCTCAAGCAGTGGAAGCGAATTTGATGAGATGTACGTGGGTGTAGGTGCACGAAGGGTCAGGGATCTTTTTTCCGCTGCTAGGAAGCGATCACCTTCTATAATCTTCATTGACGAGATAGATGCTATTGGAGGGAACCGAAGTGCGAAGGACCAAACTTACATGAAGATGACATTAAATCAATTGCTGGTTGAGTTAGATGGATTCAAACAAAATGAAGGCACAATTGTGATTGGAGCAACTAATTTTCCAGAGTCATTGGATAAGGCTTTGGTGAGACCTGGTCGATTTGATCGCCATGTTGTTGTTCCCAATCCAGATGTAGAAGGAAGACGGCAGATTTTGGAGTCGCACATGTCAAAGGTTATGATGGCTGATGATGTTGATTTGATGGTCATTGCTCGAGGAACACCTGGGTTCTCTGGTGCTGACCTTGCAAACTTGGTTAATGTAGGCGCCCTTAAGGCTGCAATGGACGGTGCTAAAGCTGTGACCATGGCCGATTTAGAGTATGCAAAGGACAAGATCATGATGGGAAGTGAACGCAAGACAGCCATCATATCTGAGGAATCGCGAAAGTTGACTGCTTACCATGAGGGTGGCCATGCCCTTGTGGCCATTCACACCGATGGGGCCCTTCCCGTTCACAAGGCGACAATAGTTCCCCGAGGGATGGCCCTCGGCATGGTTACTCAATTACCCGAGAAGGATGAGACCAGCATATCCCGTAAACAGATGCTTGCCCGGCTTGATGTTTGCATGGGAGGCCGGGTAGCAGAAGAGCTCATTTTCGGGGCAAACGAAGTTACTGCTGGCGCGTCGTCCGACCTCAAGCAGGCGACTAAGCTAGCAAGGGAAATGATTACTAAATATGGTATGGGAAAGGAGACTGGACTTGCCACTCACAATTACAATGATGATGGGAGAAGCATGAGCTCAGAGACAAGGCTTCTTATTGAGAAAGAGGTGAAGCATTTCTTGGAGAGAGCTTACAACAATGCAAAAACAATTCTAACCACTCACAACAAGGAACTCCATGCTCTTGCAAATGCTCTTCTTGAACATGAGACCCTTTCAGGAACTCAGATAAGAACACTTCTTGCTCAAGTTAGATCCCAGAAACAGCAGCAGCAGCAGCAGCCGCACATGGTCGAAGTGCAGAGCAGATCTTAG 2073 0.4573 MAWRPLLTQVSRRQLEFGQAKHLFLRGHFSINKFRDCAGNRLLPTQERFKSSYVGDFNRRIRDADEAVEISHLKELYHRNEPEAVIRLFESQPSLHANPSALSEYIKALVKVDRLDESELLKTLRRGMPNAVREEESIDGFSSLRNMRGQESIGGFSAFRNLGTPARERILGTASSPVHMVATEAASFKDRLWRAFRSIVVVFLLISGAGALVEDKGVGQGLGEHEGVLPSMESSTRFNDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSSSGSEFDEMYVGVGARRVRDLFSAARKRSPSIIFIDEIDAIGGNRSAKDQTYMKMTLNQLLVELDGFKQNEGTIVIGATNFPESLDKALVRPGRFDRHVVVPNPDVEGRRQILESHMSKVMMADDVDLMVIARGTPGFSGADLANLVNVGALKAAMDGAKAVTMADLEYAKDKIMMGSERKTAIISEESRKLTAYHEGGHALVAIHTDGALPVHKATIVPRGMALGMVTQLPEKDETSISRKQMLARLDVCMGGRVAEELIFGANEVTAGASSDLKQATKLAREMITKYGMGKETGLATHNYNDDGRSMSSETRLLIEKEVKHFLERAYNNAKTILTTHNKELHALANALLEHETLSGTQIRTLLAQVRSQKQQQQQQPHMVEVQSRS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03004 690 CDD AAA 272 404 - -
Adu06g03004 690 PANTHER METALLOPROTEASE M41 FTSH 43 688 - -
Adu06g03004 690 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 229 667 IPR005936 GO:0004176|GO:0004222|GO:0016020
Adu06g03004 690 Gene3D - 224 405 IPR027417 -
Adu06g03004 690 Gene3D Peptidase M41 480 679 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu06g03004 690 ProSitePatterns AAA-protein family signature. 375 393 IPR003960 GO:0005524|GO:0016887
Adu06g03004 690 SUPERFAMILY FtsH protease domain-like 486 670 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu06g03004 690 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 43 688 - -
Adu06g03004 690 SMART AAA_5 271 407 IPR003593 -
Adu06g03004 690 Pfam ATPase family associated with various cellular activities (AAA) 275 404 IPR003959 GO:0005524|GO:0016887
Adu06g03004 690 Gene3D - 406 479 - -
Adu06g03004 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 475 IPR027417 -
Adu06g03004 690 Pfam AAA+ lid domain 427 470 IPR041569 -
Adu06g03004 690 Pfam Peptidase family M41 486 665 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu06g03004 690 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 671 IPR005936 GO:0004176|GO:0004222|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03004 Adu-Chr6 108072993 108077882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03004 65 667 Miscellaneous Gene Families AT5G53170 50.081 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03004 K08955 - jre:109020493 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g03004 06 108072993 108077882 Adu06g03004 06 108072993 108077882 ECH