Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02981 ATGGGTGAGGCTCCTCAACTTCTCTATGTTAATGGTTTTTCAAAATTTTGCCATGAAACTCAACAAACCCATGGCAATGGTATTCTTCATAATAATAATAACCACCATGAATTCTCAAGGTTTGACCCTGAAAATCAACAAAAGAATGGAAGTAATGGTAACTATGATTCCTCATCATGGTATGAGGAAGTCATTGATGATGATCTCAAAATAACTTCATCAACCATTTTTTTTTTAATCTTCAACAGGGTCCTCCACAAAGGGGTTAGCAAGTACCAAGACATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCTTTGATGATTGATGGAAAGATGCAGAGTGCTGAATCAGATGAGTTTATTTATCATGAATGCTTGATTCATCCCTCCCTTTTATGCCACCCCAACCCCAAAAAGGTGTTTATTATGGGAGGAGGTGAAGGTTCTGCTGCTAGGGAAGCCCTCAAACATAAGACAATAGACAAAGTTGTCATGTGCGACATAGACCAGGAGGTGGTAGATTTCTGTAGGAAATATTTGACTGTGAATAGGGAGACATTTTATCACAGGAAGCTTGACCTTGTCATCAATGATGCCAAGGCTGAGTTGGAGAAGAGAAAGGAAAAGTATGATGTGATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTTTATGAGAAAATCTTGAAGCCCAAGCTCAATGATCATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGTATATTCACACACAAGGAGGTCTTCACTTCCATATATAACACAATCAAACAGGTCTTCAACTGCTTAATACAATTTTTTTTCTTATCCTTTGTAGATGTGATGGTATATTCCACTCATGTACCATCTTTTGCTGATACATGGGGATGGGTTATGGCTTCTGATGAACCATTATCAATTGGTGCTGAGGAAATGGACAAAAGAATCAAAGCAAGGATAGATGGAGAATTGCTTTATTTAAATGGTGCTTGGTTCCAATCAGCTGCTACCATGAATAAGACTGTTTCACAATCGTTGAAGAACGAAAGTCACGTGTACACAGAAGAAAATGCTAGATTTATTCCTGGGCATGGTGTGGCTTATCGTCTCTAA 1143 0.3928 MGEAPQLLYVNGFSKFCHETQQTHGNGILHNNNNHHEFSRFDPENQQKNGSNGNYDSSSWYEEVIDDDLKITSSTIFFLIFNRVLHKGVSKYQDIALLDTKRFGKALMIDGKMQSAESDEFIYHECLIHPSLLCHPNPKKVFIMGGGEGSAAREALKHKTIDKVVMCDIDQEVVDFCRKYLTVNRETFYHRKLDLVINDAKAELEKRKEKYDVIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDHGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFNCLIQFFFLSFVDVMVYSTHVPSFADTWGWVMASDEPLSIGAEEMDKRIKARIDGELLYLNGAWFQSAATMNKTVSQSLKNESHVYTEENARFIPGHGVAYRL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02981 380 CDD AdoMet_MTases 145 253 - -
Adu06g02981 380 MobiDBLite consensus disorder prediction 24 55 - -
Adu06g02981 380 Pfam Spermidine synthase tetramerisation domain 82 117 IPR035246 -
Adu06g02981 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 356 IPR029063 -
Adu06g02981 380 Gene3D Vaccinia Virus protein VP39 117 379 IPR029063 -
Adu06g02981 380 Gene3D Spermidine synthase, tetramerisation domain 40 116 IPR037163 -
Adu06g02981 380 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 54 379 - -
Adu06g02981 380 PANTHER BNAA02G04280D PROTEIN 54 379 - -
Adu06g02981 380 Hamap Polyamine aminopropyltransferase [speE]. 59 357 IPR001045 GO:0003824
Adu06g02981 380 Pfam Spermine/spermidine synthase domain 120 281 - -
Adu06g02981 380 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 58 312 IPR030374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02981 Adu-Chr6 107721240 107725824 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02981 K18787 - gmx:100784972 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02981 06 107721240 107725824 Adu06g02981 06 107721240 107725824 ECH