Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02979 ATGAAGAACAACACACTCACAGATCATGAACACTACCACCATAGCACCAGATTCCTTCACAATCCTTCTTTCTCTTCAACCCTCCTTGACCAAATCTACCGTTCCATTGACCAATCCGAACAACACAATTACACAAATACCCCCAATCACATGAACACCTTCTTCACACCAACAACTTCAAGAACAGAGAAGAACAAGAAACAGGAAACATCAACAAGAAGCACGTCACGTGACTATGACAATGACGTCACGTGCTTCAGTTCCACGTCACTTTCCTCCGATTCCAGCTCGTCCTCTTCTTCTTCCGCGGGATTTTCATCCTCCGACACGGAGTCAACAAGGCCGTCAAGGACGCGCTCGTCCTCATCGTGCTTCTTGCCTCTGAGGCCGGTGAAGACCAGCGCGTCCTTGAGGGACGAGGAGAAAGGAGACGATAATCGTCGAAAGTTCCACAGCTTTCGCCACGATTTCAAAACCGAATTAGGCGCTCTAATCGGCGGCGATCGTGGCGAAGATGATTACGAATCATTGTCCATGAAATCCAAGTCAAGAGCGTTGAAGATCTATAACAATCTCAAGAAGGTGAAGCAACCAATTTCACCCGGTGCTAAGATCACTAGCTTTCTCAACTCGATCTTCGCTACTTCCAAGAAAACAAAGTGCACCAACCATGACATAAAGAATATTTATCAGAATCGATTACATGAATCAAACGACAGTTATAAGAACGTGGACAACGATGCAAAAAAGCCAAAGTCAATTCAAACTTCATTGCCTTCTACTTGTTCATTTTCGAGGTCTTGTTTGAGTAAAACTGGTCGGCTACATAGACCAAACGACATTCCAGAGGAAGAAAGAGAAGCCAAGTTAGTTCAAAATTCAACACATTCTTCTCTTTCTTCTTCTAAATCTTGTTTGAGCAAGACTCTAACTTCCGAAAGGGAAAAGCTTCGCAACGGGGCGAAAAGAACGGTTCGATTCTACCCCGTGAGCGTGATTGTGGGTGAAGAAGGAATCAATAATAAAGTTGCCACAAAAACATGGAAGAATAGCACCAACGTAGAGAAGAGCAAGGTGGTGAAAGAAGCTGCAAGGGAGTTCTTGGAAGAGTACCACAAGAACAAGAACAAGAACAATTTGGTTTCAGAAGCTTTAATGGATTTGCATAAAAATAATAATAGCAAAATAAATAATGCAAATGAAGATGATGAAGACGACAACGACGATCACGATGACGTGGCAAGTTGTGCAAGTTCGGATCTGTTTGAGCTTGATCATTTGGCTGAGCTTCCTGTGTATGAAACAACTCATGTTAGCACTAATCGTGCCATTGCTAATGGTCTTGCTGTGTAG 1353 0.4324 MKNNTLTDHEHYHHSTRFLHNPSFSSTLLDQIYRSIDQSEQHNYTNTPNHMNTFFTPTTSRTEKNKKQETSTRSTSRDYDNDVTCFSSTSLSSDSSSSSSSSAGFSSSDTESTRPSRTRSSSSCFLPLRPVKTSASLRDEEKGDDNRRKFHSFRHDFKTELGALIGGDRGEDDYESLSMKSKSRALKIYNNLKKVKQPISPGAKITSFLNSIFATSKKTKCTNHDIKNIYQNRLHESNDSYKNVDNDAKKPKSIQTSLPSTCSFSRSCLSKTGRLHRPNDIPEEEREAKLVQNSTHSSLSSSKSCLSKTLTSEREKLRNGAKRTVRFYPVSVIVGEEGINNKVATKTWKNSTNVEKSKVVKEAAREFLEEYHKNKNKNNLVSEALMDLHKNNNSKINNANEDDEDDNDDHDDVASCASSDLFELDHLAELPVYETTHVSTNRAIANGLAV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02979 450 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 284 449 IPR039621 GO:0009734
Adu06g02979 450 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 6 53 IPR039621 GO:0009734
Adu06g02979 450 PANTHER PROTEIN BIG GRAIN 1-LIKE B 63 272 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 393 414 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 276 291 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 292 307 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 239 258 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 77 125 - -
Adu06g02979 450 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 63 272 IPR039621 GO:0009734
Adu06g02979 450 MobiDBLite consensus disorder prediction 273 307 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 42 61 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 42 125 - -
Adu06g02979 450 MobiDBLite consensus disorder prediction 62 76 - -
Adu06g02979 450 PANTHER PROTEIN BIG GRAIN 1-LIKE B 6 53 - -
Adu06g02979 450 PANTHER PROTEIN BIG GRAIN 1-LIKE B 284 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02979 Adu-Chr6 107701441 107702935 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02979 - - aip:107648546 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02979 06 107701441 107702935 Adu06g02979 06 107701441 107702935 ECH
Adu10g01965 10 88636425 88637651 Adu06g02979 06 107701441 107702935 ECH
Adu01g02019 01 87177449 87178546 Adu06g02979 06 107701441 107702935 ECH
Adu09g00835 09 12606580 12608184 Adu06g02979 06 107701441 107702935 ECH