Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02881 ATGACAACAAGCATGGTCACATTTTTCACAACCCTTTTGGTTATACTCATGAGTTTCCAAACTGAATCATTGCAACATCCAATGCCATCGCCATATTATTCAGGATCAGTTAAAGCTGGATATTGGCCTTCAGGTAATTCTCTCTCACCTTCTTCCATTGACACAAGGTACTTCACACACATCTACTATGCCTTTGTAGAGCCAGAACCAAACACCTTCAACCTCATAATCACATCCTCCGACCAAAACTACATACCTCAATTCATCAATGGTTTAAGCAGCCGGAACCCTCCCGTCAAGACCATATTGTCCATCGGAGGGGGTTCCAGCAATGCTACCTTATTCTCTTTGATGGCTAGCACGGTAAAAAACCGTGCAGCCTTCATAAACTCCACAATCCAAGTGGCCCGTCAATATGGTTTTGACGGACTAGACTTGGATTGGGAGTTCCCTCAAAATGAGCAAGACATGGCAAACCTTGCTTTGTTGTTCAAAGAATGGCACCAGGCTGTGGTTTTGGAAGCCAAGGTTCATAGAAGGCCACGTTTGCTGTTGACCGCAGCTGTGTACTATGCTCACACAATAGTACTTATTGGGCCTAGCCGAAGGTCTTATCCGGCCCAAGCTATTAAAGATTACTTGGATTGGGCCAGCCCTATGTGCTTTGATTACCATGGTGCATGGTCCAATTTCACTGGCTACAATAATGCTTTATTTGATCCTAAGTCCAATATAAGCACCCAATTTGGTCTCGGATCTTGGATCCAGTCCGGCGTTCCGCCCTCAAAGCTGGTTTTTGGGTTACCGCTTTACGGGCGAGCGTGGAAGCTCCAAGATCCGAAAGTTCATGGGGACGGAGCGCCCGCAGTTGGAGCAGCCGATGGCACGGATGGTACTATGAATTATAATGATATCTTGGAATTTAATAAAAAGAATAAGGCTACAGTTGTGTTTGATAGGTCAGCTGTGTCTTATTACACTTATGCTGGCACTACTTGGATGAGCTATGATGATGCACCTTCCATGACAAGGAAGGTTCAATATGCTAAGTCTTTGGGATTGAAAGGATATTTCTTTTGGCAAGTTGGAGGCGATAGGAGTTGGACTATGTCAAGACAAGCTTCAAGTTCGTGGGGACACTGA 1143 0.4497 MTTSMVTFFTTLLVILMSFQTESLQHPMPSPYYSGSVKAGYWPSGNSLSPSSIDTRYFTHIYYAFVEPEPNTFNLIITSSDQNYIPQFINGLSSRNPPVKTILSIGGGSSNATLFSLMASTVKNRAAFINSTIQVARQYGFDGLDLDWEFPQNEQDMANLALLFKEWHQAVVLEAKVHRRPRLLLTAAVYYAHTIVLIGPSRRSYPAQAIKDYLDWASPMCFDYHGAWSNFTGYNNALFDPKSNISTQFGLGSWIQSGVPPSKLVFGLPLYGRAWKLQDPKVHGDGAPAVGAADGTDGTMNYNDILEFNKKNKATVVFDRSAVSYYTYAGTTWMSYDDAPSMTRKVQYAKSLGLKGYFFWQVGGDRSWTMSRQASSSWGH 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02881 380 Gene3D - 270 336 IPR029070 -
Adu06g02881 380 Pfam Glycosyl hydrolases family 18 39 365 IPR001223 GO:0005975
Adu06g02881 380 SMART 2g34 36 365 IPR011583 GO:0008061
Adu06g02881 380 Gene3D Glycosidases 51 366 - -
Adu06g02881 380 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 36 380 IPR001223 GO:0005975
Adu06g02881 380 SUPERFAMILY (Trans)glycosidases 36 369 IPR017853 -
Adu06g02881 380 PANTHER CHITINASE 23 379 - -
Adu06g02881 380 PANTHER CLASS V CHITINASE CHIT5A 23 379 - -
Adu06g02881 380 SUPERFAMILY Chitinase insertion domain 271 336 IPR029070 -
Adu06g02881 380 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 141 149 IPR001579 GO:0004553|GO:0005975
Adu06g02881 380 CDD GH18_plant_chitinase_class_V 37 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02881 Adu-Chr6 106386659 106388120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02881 7 378 Glycoside Hydrolase AT4G19810 42.246 1.21e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02881 K01183 - gmx:100787511 521.931