Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02875 ATGGCATCTTCAGTGCTATCCATAGCTACACAGTGTGTTTCTCCCAATGCTTCTTCACTGTCGATTAACGAAACCCACAAGGGAAAGGCCAAGCTTGGAGGAAGTACTTTGAGATTTAGCAAATCTTCTGGACGGATCTCTATGACTGTTGCAGTTAATGTTTCTCGATTTGAGGGCATTCCGATGGCTCCTCCTGATCCAATTCTTGGAGTATCAGAAGCATTTAGAGCAGACACAAATGATGTCAAGCTCAACCTTGGAGTTGGGGCCTACAGGACAGAGGAACTACAGCCATATGTGCTTAATGTTGTGAAGAAGGCAGAGAATCTTATGCTGGAGAGAGGAGACAACAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCATTTAATAAGGCAACAGCAGAGTTGTTACTCGGAGCAGACAACCCTGCAATCAAAGAACAAAGAGTTGCTACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTCAGACTAGGAGCAGCCCTGATAGAACGATATTTTCCCGGGTCAAAAGTTTTGATATCGGCTCCCACCTGGGGTAATCACAAGAATATTTTTAATGATGCTAGGGTCCCATGGTCTGAGTACCGTTATTATGATCCCCGGACAGTTGGTTTGGATTTTGAGGGCATGATAGAAGATATTAAGGCAGCTCCCGAAGGAACTTTTGTGCTACTTCATGGATGTGCCCATAACCCTACTGGTATTGACCCAACACCTGAACAGTGGGAAAAAATAGCAGATGTAATTCAACAGAAGAACCACATTCCATTTTTCGATGTTGCTTACCAGGGATTTGCTAGTGGAAGCCTTGATGAAGATGCAGCATCTGTGAGATTGTTTGTGGCACGTGGCATGGAGGTTCTTGTTGCCCAATCTTACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATGAATGTCATTTCATCATCTTCTGAATCTGCAACAAGGGTAAAGAGCCAATTGAAGAGGCTAGCACGACCAATGTACTCTAATCCACCAGTTCATGGGGCCAGGATTGTCGCCAACGTTGTTGGAACTCCTATCCTTTTTGATGAATGGAAAGCGGAGATGGAGATGATGGCTGGAAGGATAAAGAATGTCAGGCAGAAGCTATATGATAGTATTTCTTCAAAAGATAAGAGTGGGAAAGATTGGTCATTCATACTTAAGCAGATAGGCATGTTCTCATACACAGGCTTGAACAAGAACCAGAGTGACAATATGACCAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCACTGGCAGGATTGTCATTGGCCAAATGTGAATACTTGGCTGATGCTATCATTGATTCATACCATAATGTCAGCTGA 1374 0.4338 MASSVLSIATQCVSPNASSLSINETHKGKAKLGGSTLRFSKSSGRISMTVAVNVSRFEGIPMAPPDPILGVSEAFRADTNDVKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKEQRVATVQGLSGTGSLRLGAALIERYFPGSKVLISAPTWGNHKNIFNDARVPWSEYRYYDPRTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQQKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAMNVISSSSESATRVKSQLKRLARPMYSNPPVHGARIVANVVGTPILFDEWKAEMEMMAGRIKNVRQKLYDSISSKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02875 457 SUPERFAMILY PLP-dependent transferases 55 451 IPR015424 -
Adu06g02875 457 PRINTS Aspartate aminotransferase signature 230 249 IPR000796 GO:0006520|GO:0008483
Adu06g02875 457 PRINTS Aspartate aminotransferase signature 261 273 IPR000796 GO:0006520|GO:0008483
Adu06g02875 457 PRINTS Aspartate aminotransferase signature 329 354 IPR000796 GO:0006520|GO:0008483
Adu06g02875 457 PRINTS Aspartate aminotransferase signature 398 416 IPR000796 GO:0006520|GO:0008483
Adu06g02875 457 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 22 455 - -
Adu06g02875 457 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 299 312 IPR004838 GO:0003824|GO:0009058|GO:0030170
Adu06g02875 457 Gene3D - 115 356 IPR015421 GO:0003824
Adu06g02875 457 PANTHER ASPARTATE AMINOTRANSFERASE 22 455 IPR000796 GO:0006520|GO:0008483
Adu06g02875 457 Gene3D Aspartate Aminotransferase, domain 1 60 449 IPR015422 GO:0003824
Adu06g02875 457 CDD AAT_like 84 449 - -
Adu06g02875 457 Pfam Aminotransferase class I and II 83 449 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02875 Adu-Chr6 106260651 106265239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02875 K00811 - gmx:547792 822.002