Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02839 ATGGCTTTGAACACTACCAAGCTTTTTGCCACAATTCTTGTTGTGTCACTCCTTTCAACACCTTTATTAACCAATGCATGTGGATCATGCAAGGCACCAACTCCGCCACCACCAAAAGCAAAATGCCCCAAAGACACATTGAAATTAGGTGTTTGTGCTGATGTCTTAGGACTTGTTAACGTTATTGTTGGTTCCCCAGCTTCAAGCAAGTGTTGTGCATTGCTTCAAGGCTTGGTTGATTTGGAAGCAGCACTTTGTTTGTGCACCGCTATTAAGGCCAATGTTCTTGGCATCAACTTAGATATCCCTCTCACTCTCAGCTTGCTCCTCAGTGCTTGTCAAAAATCACTTCCTTCTGGCTTCCAATGTTAA 372 0.4328 MALNTTKLFATILVVSLLSTPLLTNACGSCKAPTPPPPKAKCPKDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLVDLEAALCLCTAIKANVLGINLDIPLTLSLLLSACQKSLPSGFQC 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02839 123 PANTHER - 25 123 - -
Adu06g02839 123 CDD HPS_like 45 123 IPR027923 -
Adu06g02839 123 Gene3D - 42 123 IPR036312 -
Adu06g02839 123 SMART aai_6 42 123 IPR016140 -
Adu06g02839 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 45 123 IPR036312 -
Adu06g02839 123 PANTHER LIPID TRANSFER PROTEIN 25 123 - -
Adu06g02839 123 Pfam Hydrophobic seed protein 42 123 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02839 Adu-Chr6 105659439 105660581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02839 16 123 Acyl Lipid Metabolism Gene Families AT4G22490 37.963 8.82e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02839 - - gmx:100306307 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02839 06 105659439 105660581 Adu06g02839 06 105659439 105660581 ECH
Adu06g02839 06 105659439 105660581 Adu08g02556 08 41615982 41617460 PCT