Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02829 ATGGCACACACTAGCTTAATAATGCCGAACCCTAACCACGCTTCCTCTCCTTCTCGATCACCCTTGTCGATTCAATTCTCTTCGATCCCAACCATGGACCGCATTTTCTCCAGTAAGAGTTTCCTTTATAATAGGCTTCGATCTCAGCCTCTCAGCCTTACTGTTCTCAAATTGGATGGATCTACCTTCGATATTCAAGTTGAGAAGACAGCAACTATTGCTGAGCTTAAGGAGGCGGTGAAGGTGGTGTTCAGTCACATGCCTCAGAAGGGGCCAGGGAAGATTTCATGGCCACATGTTTGGCGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTTGTTAAAGATGATGATTACCTGAGAAATTATGGCATCAAGGACGGTGATCAGCTTCGTTTCATCCGCCATGTCTCAAACTATTATAGTGCTCGAAGAAGAAAGCGATCAAAGAAACGAGTTTTCCATTTTAAACAGCACAGCAGGTCATCCTCGCAAGTGAATAGTTATCAACCTAAAGAACATAGTGATGATGATGAAGAAGAAGAAATTTGTTCCGATGAGGTAGCCACTGAGGATAGGAAGATCGAGCTGTACAATAAAGTACGAGTTCATGTTGGAAAGAACAAGTTAACCAGCTTTGTTGCAGAGTTATTCTCATACAACAGGCTGCCCATTGTACCGAAAACGAGAACTCAAAGTAGGATATTCTTCCCCTCAGTGGTCGCCAAATGTTTACTAGGAAGTTTTAGAAAGATGAGAAGAGTCATAAGCTTTCGCAGGAGGGGACACTATCCTTGGAGGGATATCAGAAGACAGTATTGA 822 0.4319 MAHTSLIMPNPNHASSPSRSPLSIQFSSIPTMDRIFSSKSFLYNRLRSQPLSLTVLKLDGSTFDIQVEKTATIAELKEAVKVVFSHMPQKGPGKISWPHVWRQFCLCYDGQKLVKDDDYLRNYGIKDGDQLRFIRHVSNYYSARRRKRSKKRVFHFKQHSRSSSQVNSYQPKEHSDDDEEEEICSDEVATEDRKIELYNKVRVHVGKNKLTSFVAELFSYNRLPIVPKTRTQSRIFFPSVVAKCLLGSFRKMRRVISFRRRGHYPWRDIRRQY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02829 273 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 4 269 IPR039690 GO:0000398|GO:0005689
Adu06g02829 273 ProSiteProfiles Ubiquitin domain profile. 51 134 IPR000626 GO:0005515
Adu06g02829 273 CDD Ubl_SNRNP25 51 136 IPR040610 -
Adu06g02829 273 SUPERFAMILY Ubiquitin-like 48 140 IPR029071 -
Adu06g02829 273 MobiDBLite consensus disorder prediction 1 20 - -
Adu06g02829 273 PANTHER - 4 269 - -
Adu06g02829 273 Pfam Ubiquitin-like domain 52 137 IPR040610 -
Adu06g02829 273 MobiDBLite consensus disorder prediction 145 183 - -
Adu06g02829 273 SMART ubq_7 51 136 IPR000626 GO:0005515
Adu06g02829 273 Gene3D - 45 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02829 Adu-Chr6 105560371 105564097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02829 - K13153 ahf:112697496 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02829 06 105560371 105564097 Adu06g02829 06 105560371 105564097 ECH
Adu08g02543 08 41460541 41461663 Adu06g02829 06 105560371 105564097 ECH
Adu06g02829 06 105560371 105564097 Adu08g02543 08 41460541 41461663 PCT