Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02758 ATGGGGTGTGGAAAACTGAAGAGGTTTCTTGTTATGGTGTTGTTCATTGAACTTTTGGTGTGCTCAGTGGTGAGTGGAATTGGTGTTAACTGGGGAACACAAGCAACACACCCTTTGCCACCATCAACAGTGGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTGAAGCTTTTTGATGCTGACTCAAATATCTTAGAGGCTCTTAAGAAGACTCAGATCCAAGTCATGGTTGGTATCCCAAATGACATGCTTTACACACTTGCTAACAGTGTTCAAGCTGCTGAAAAATGGGTCTCAAAGAATATCTCAGCTCATATCTCATCTGGTGGAGTAGACATCAGGTATGTCGCCGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGAACGTTCGAGTCCACAACCCTTCCGGCTCTTCAAAACATCCAATCAGCTCTTGTGAAGGCTGGTTTGGGCAACAGGGTTAAAGTCACCACCCCTTTAAATGCTGATGTGTATCAAAGTTCGTCGGATAAACCTTCCGACGGAGACTTCAGGACAGACATCCATGATCTCATGATAAAAATTGTCAGTTTCTTGAGCCAGAACAATGCTCCATTCACTGTAAACATCTACCCTTTCATCAGCCTCTACGCGGATCCCAACTTCCCAATGGACTATGCCTTCTTCAATGGCTTCTCGAGTGCTATAAACGACAATGGAAAGATCTATGACAATGTGTTTGATGCTAACCATGATACTCTAGTATGGGCATTGCAGAAGAATGGCTTCGGAAACCTGCCCATTATTGTCGGAGAGATTGGGTGGCCTACAGATGGGGACCGGAATGCGAACCTTCAATACGCCCAACGCTTCAACCAAGGCTTCACGTCTAGATATCTTGGCGGAAAAGGTACCCCAATGAGGCCGGGTCCGATCGATGCCTACCTATTTAGCCTCATAGATGAAGACAGCAAAAGCATTCAGCCAGGTAACTTCGAACGCCATTGGGGATTGTTTTACTACGACGGAAAGCCAAAGTACCAACTCAGCCTTGGACCGACAAGTCCGAACGGCTTGGTAGCTGCTAGTGGCGTCGCATATCTTCCTAAAAAGTGGTGTATTATGAAGCCTTCGGCGAACCTCAACAGCGACCAAGTTGCGCCGAGTGTGTCTTATGCGTGCCAAAATGCTGATTGCACTAGTCTTGGATATGGAACTTCATGTGGAAATTTGGATGTTCAAGGTAACATATCTTATGCATTTAATAGCTATTTTCAGGTGAATGATCAAATGGACAGTGCATGCAAATTTCCTGGACTTTCTGTTGTCACCGAGAGAGATCCTTCAGTGGGTGATTGCAAATTCAAAATCATGATCCAGACAGATTCTGCTGTCAGAATTGGTTCTGTTAGAATATTGCTATTTGTATTCTTGTTTTTAGGTATTGTTGTGTAA 1440 0.4403 MGCGKLKRFLVMVLFIELLVCSVVSGIGVNWGTQATHPLPPSTVVKMLKDNGIQKVKLFDADSNILEALKKTQIQVMVGIPNDMLYTLANSVQAAEKWVSKNISAHISSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALVKAGLGNRVKVTTPLNADVYQSSSDKPSDGDFRTDIHDLMIKIVSFLSQNNAPFTVNIYPFISLYADPNFPMDYAFFNGFSSAINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFTSRYLGGKGTPMRPGPIDAYLFSLIDEDSKSIQPGNFERHWGLFYYDGKPKYQLSLGPTSPNGLVAASGVAYLPKKWCIMKPSANLNSDQVAPSVSYACQNADCTSLGYGTSCGNLDVQGNISYAFNSYFQVNDQMDSACKFPGLSVVTERDPSVGDCKFKIMIQTDSAVRIGSVRILLFVFLFLGIVV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02758 479 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Adu06g02758 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 15 458 - -
Adu06g02758 479 Pfam X8 domain 366 435 IPR012946 -
Adu06g02758 479 Gene3D Glycosidases 26 349 - -
Adu06g02758 479 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Adu06g02758 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 458 IPR044965 GO:0004553|GO:0005975
Adu06g02758 479 SMART X8_cls 366 450 IPR012946 -
Adu06g02758 479 Gene3D - 363 459 - -
Adu06g02758 479 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02758 Adu-Chr6 104544187 104547861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02758 9 475 Glycoside Hydrolase AT4G31140 69.118 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02758 K19893 - gmx:100775918 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02758 06 104544187 104547861 Adu10g01685 10 77049775 77051716 PCT
Adu08g02437 08 40097788 40100831 Adu06g02758 06 104544187 104547861 PCT