Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02752 ATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTACTATTGCCCACACTGTCGCGCCTTAAACAAACCAAAGCAATCAGATGAGCGTGTCTCTAGTGGTAACTCCCCAAATATGAGGTTTCCAAACACAGATGATGGTGAAGCAGTAATTAAAACTGTTAGTGCTTCTGCTGCTGACAGCATAATCAAAAGCAATAATCCCTTAGATACTGCTACCCCTGAGATTGAAGAAGTATCCGAAGTGGCTAGTTCAGGGGAGAAAAATAGTGCACTGTTGACACAGTGTCATCCTCGCCATCGCGTTGCCTCCATTGCCGTTAACACAGAAGCGCTCACGAAGGATCAAACCCGCCTTCGCGTCGCCGCCGCAACGTTTGAAGTTCTCTCGGACCTCACTCGTGAGCTCGTCTTTTTCCTCTCTCTGGTTATATATTCTACTATGAGTAGACCAAATACGCGAAGCAAAAACAAGAGGCAGAGGCAAGGGGATGATGTTGATAGCACTACCGAAATATGGAGGAAAATTCACAAAACGGGTGGTATAACTGAAGAAGATATAAACCAATTGTATATGATTTGGAAGCCGGTTTGTTCAGGTTGCCGTGTCAATGCTAAAGACAACCCAAATTGCTTCTGTGCATTGGTTCCTCCTCCAAATGGATCGCGGAAGTCTGGCTTGTGGATGAAGACGTCAGATTTTGTTGAAAGTCTTGGCCCCGACCCAACTAAGGATCTTCGCGCATCTGCTTCTTCACCTGCGGGTCTAACAAATCTTGGTGCAACCTGCTATGCCAACAGTATACTTCAGTGCTTGTACATGAATAAATCTTTCCGGGAAGGCATATTTTCTGTAGAACCAGAAGTTTTGCAACAGCAACCGGTGTTAAATCAGCTGCGTTGCCTGAGCCATTCCAAAATTGCAAAGGCAAGAACAATAGTTCAAGATCTTTTTCGTGGAAATGTGTCTCACGTGACAAAGTGCTCGCAATGTGGAAAAGACTCTGAAGCTTCTTCGAAAATGGAAGACTTCTATGAGTTGGAGTTGAATGTCAAGGGATTACAAAGTTTATATGAGAGCCTAGATGATTACCTTGCTATTGAAGAGCTTCATGGAGACAACCAATATTATTGCGACTCATGTAGAGCAAGAGTTGATGCAACTCGTAGCATCAAGCTCCGCTCATTGCCCGAAGTACTTAATTTTCAACTTAAACGATATGTTTTTCTTCCAAAGGTATTATTGTTTGAATCATCTCCTTTTGAGTTGATATATGACTTGTCAGCTGTACTAATTCACAAGGGAAGTGCTGTTAATAGTGGTCACTACATTGCTCATATTAAGGATGAAAATACTGGGCAATGGTGGGAATTTGATGATGAAAATGTCACTAACTTAGGTCGTCATCCCTTTGGTGAAGAAGCTTCAAATTCTACTTCTAAATTAGCCAAGACTGATGTAGTTCATAGTAATTGCTCTGAAGCAAAGATAGCTGACAGTAATGGGAATGGTTTAGATGCCAAACTGTCTCACTCTTCCCATGTGGAGACATTTTCTTCTAGCGATGCATACATGTTGATGTACCATCTTAAACGTTCGAAGAATGTTGATGGAAAAGATGTTATGTTTTCTGGTACTAACCATAAAGGAGAGCGTGATGCAGTTACTGCCCAGGATGATGCTTGTCTTCCTTTCCATCTTCGTGAAGAGATTAAAAATATCAATGCCTCATATCTTGATGCTTGTGAGCAGTACAAGCAAAAGAAAGAGTTAGAATTGAGTCGTATCAATGAGCGGAGACAGGAAGTTCGATCTGTTTTAGCTGAAGCCCCTGTTCAGCCACTGAAGCAACCATTTTTTTGGATTTATAGTGACTGGCTTCGCCAGTGGGCTGACAACATCATTCCAACTGCTGTTGACAACACATCTATTCAATGTTCACATGGGAAAGTCCCAGTATCAAATATTACCACAATGAAAAGATTGTCTTCTCAAGCATGGGATAAGCTACTCTCTAAGCATGGTGGGGGGCCCACACTTTCTCATGATGATTGCTGTTGGGATTGTCTGATTGAAGGAGCTCGGAATGTGGTGTCAGCTGATACCTATCGGGATCGAAGGGAATCACTGAAGCAGCTTGCACGGGATGTTCTAGATGGACATTGTGAAGATGGAAAGTACTACATTTCCAGGCCATGGTTACAGCAATGGTGGAAACGAAAAGTTCTTGATGCTCCATCTGAAGCTGATGCTGGACCAACAGCAGCTATTAGCTGTCCACATGGGCAGCTTATGCCTGAACAAGCTGCTGGTGCTAAGAGAGTGCTTGTTCCTGAGGATTTTTGGCTCTTCTTATATGAAGATTCTATCTCTGTAAAACCTGATGATCCTTTGGGTTGCCCTACTTTCCCTGTTGACTCCAGAGAGTGTTCTGAATGCAGTAATGAATTATCTGAAGTGGCTTGCTTTGAGGATTCATTGAGGTCATTAGTGAAGCAAAGACAACGTCAGAAACATGAGAAACTATTCCTGGGTAAAAGTATGCCGCTCTATCTGCATTGCAAGTATTTCTTAGTTCCATCTTTGTGGATTTCAAAATGGAGAAACTATGTTAATCCATCTGTAAAGAATTCAGATAAACCTGAAACATTAGATGGGGTAATTGATTCACTGAAGTGTGAAAAGCACTCACGACTAGTTGAGAGGCCTCCTGAATTGGTTTTCAGACGCAGTGCTATAGTTCCAAGAGAGTCTTCTGCAAGTGGTGTAACAGTTATATCTGAAAATGATTGGAAACTCTTATGTGAAGAATGGGGTGGTAATGAGGCCAAAGGAATATCTGCCAGTATTGAAAATATTGATGAGTCTGAGAATGTTTTGATTGGATCATGTGAAGAGTTGCCAGTATGTGAGGATCAGTTGGGTTCTTCAGATAAAGTGAATAATGAAACTGAGAATGGACAATTCGTGATCAAGACTTGTCCAGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAGTTGATGCAGAAGCTAAACTATTGCAATGAGAACATAACTGTAATACTTGTCCGTGGAAAAGAGGTACCTAGATCAATATTGGAGGCTTCGAAGGGTTTTGTTGAAACAGAACGGCGGGCTTCTAAACGCACCCGTAAAACTAAAAATGGGAGTTCTATTAGTCTGAAAGTTTCTGCTTCAACATCAATGTACCAGCTTAAAATGATGATATGGGAATCCTTTGGGGTGGTCAAGGAAAATCAGTTACTACAAAAGGGCGATAAGACAATTGACATTGATGATGAATACACTACACTTGCAGATGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGATTCTGAAATCCATGAAAATCGAGATATTGCCGAGGAACTTTATGATGAGAAAATGGATACACAGCATACCGAGGAAGGGTTCCGGGGAACACTTTTGACCTCCAATGCTTCATCCCAGGCTGTTTAG 3504 0.4172 MHNGLARKEDFPFITYYCPHCRALNKPKQSDERVSSGNSPNMRFPNTDDGEAVIKTVSASAADSIIKSNNPLDTATPEIEEVSEVASSGEKNSALLTQCHPRHRVASIAVNTEALTKDQTRLRVAAATFEVLSDLTRELVFFLSLVIYSTMSRPNTRSKNKRQRQGDDVDSTTEIWRKIHKTGGITEEDINQLYMIWKPVCSGCRVNAKDNPNCFCALVPPPNGSRKSGLWMKTSDFVESLGPDPTKDLRASASSPAGLTNLGATCYANSILQCLYMNKSFREGIFSVEPEVLQQQPVLNQLRCLSHSKIAKARTIVQDLFRGNVSHVTKCSQCGKDSEASSKMEDFYELELNVKGLQSLYESLDDYLAIEELHGDNQYYCDSCRARVDATRSIKLRSLPEVLNFQLKRYVFLPKVLLFESSPFELIYDLSAVLIHKGSAVNSGHYIAHIKDENTGQWWEFDDENVTNLGRHPFGEEASNSTSKLAKTDVVHSNCSEAKIADSNGNGLDAKLSHSSHVETFSSSDAYMLMYHLKRSKNVDGKDVMFSGTNHKGERDAVTAQDDACLPFHLREEIKNINASYLDACEQYKQKKELELSRINERRQEVRSVLAEAPVQPLKQPFFWIYSDWLRQWADNIIPTAVDNTSIQCSHGKVPVSNITTMKRLSSQAWDKLLSKHGGGPTLSHDDCCWDCLIEGARNVVSADTYRDRRESLKQLARDVLDGHCEDGKYYISRPWLQQWWKRKVLDAPSEADAGPTAAISCPHGQLMPEQAAGAKRVLVPEDFWLFLYEDSISVKPDDPLGCPTFPVDSRECSECSNELSEVACFEDSLRSLVKQRQRQKHEKLFLGKSMPLYLHCKYFLVPSLWISKWRNYVNPSVKNSDKPETLDGVIDSLKCEKHSRLVERPPELVFRRSAIVPRESSASGVTVISENDWKLLCEEWGGNEAKGISASIENIDESENVLIGSCEELPVCEDQLGSSDKVNNETENGQFVIKTCPEVCESCIGEKESCELMQKLNYCNENITVILVRGKEVPRSILEASKGFVETERRASKRTRKTKNGSSISLKVSASTSMYQLKMMIWESFGVVKENQLLQKGDKTIDIDDEYTTLADVNIFAGDQIIVRDSEIHENRDIAEELYDEKMDTQHTEEGFRGTLLTSNASSQAV 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02752 1167 ProSiteProfiles DUSP domain profile. 833 953 IPR006615 GO:0004843
Adu06g02752 1167 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 303 415 - -
Adu06g02752 1167 Pfam Ubiquitin carboxyl-terminal hydrolase 258 291 IPR001394 GO:0004843|GO:0016579
Adu06g02752 1167 Gene3D Cysteine proteinases 243 307 - -
Adu06g02752 1167 Gene3D - 829 949 IPR035927 -
Adu06g02752 1167 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 152 302 - -
Adu06g02752 1167 SMART dusp 615 686 IPR006615 GO:0004843
Adu06g02752 1167 Pfam Ubiquitin carboxyl-terminal hydrolase 426 531 IPR001394 GO:0004843|GO:0016579
Adu06g02752 1167 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 152 302 - -
Adu06g02752 1167 Coils Coil 582 609 - -
Adu06g02752 1167 ProSiteProfiles DUSP domain profile. 597 689 IPR006615 GO:0004843
Adu06g02752 1167 SUPERFAMILY Cysteine proteinases 256 535 IPR038765 -
Adu06g02752 1167 MobiDBLite consensus disorder prediction 30 45 - -
Adu06g02752 1167 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 258 273 IPR018200 GO:0004843|GO:0006511
Adu06g02752 1167 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 419 1137 - -
Adu06g02752 1167 Gene3D - 1056 1127 - -
Adu06g02752 1167 MobiDBLite consensus disorder prediction 27 48 - -
Adu06g02752 1167 CDD Ubl_USP48 1057 1160 IPR044743 GO:0004197|GO:0004843|GO:0016579
Adu06g02752 1167 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 303 415 - -
Adu06g02752 1167 Pfam Ubiquitin carboxyl-terminal hydrolase 307 412 IPR001394 GO:0004843|GO:0016579
Adu06g02752 1167 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 419 1137 - -
Adu06g02752 1167 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 428 446 IPR018200 GO:0004843|GO:0006511
Adu06g02752 1167 Gene3D Cysteine proteinases 308 534 - -
Adu06g02752 1167 SUPERFAMILY Ubiquitin-like 1059 1126 IPR029071 -
Adu06g02752 1167 SUPERFAMILY DUSP-like 600 688 IPR035927 -
Adu06g02752 1167 ProSiteProfiles DUSP domain profile. 704 806 IPR006615 GO:0004843
Adu06g02752 1167 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 257 534 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02752 Adu-Chr6 104476652 104493277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02752 315 469 Miscellaneous Gene Families AT4G31670 31.609 2.60e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02752 - - gmx:100795556 1684.85