Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02725 ATGTCAAAGCAAGCAAGTTCATACGTACCAAAGAACATCCTCATAACTGGTGCAGCTGGTTTCATAGCCTCTCATGTCACCACTAGGCTAATCAACAAGTACCCTAGCTACAAGATTGTAGCACTTGATAAGCTAGATTATTGTTCTAACATCAAGAATCTACAATGTTGTACTTCATCACCTAACTTCAAGTTCATCAAGGGTGACATAGCTAGCTCAGACATGGTCAATCATCTCTTGATAGAAGAGGAAATAGACACAATCATGCACTTTGCAGCACAAACCCATGTGGACAATTCATTTGGAAACTCCATGGAATTCACCTATAACAATATCTATGGCACCCATGTTCTTCTAGAAGCATGTAGAGTAACAAATTGCATTAAAAGGTTCATCCACGTAAGCACGGACGAAGTTTACGGCGAGACGGATTCCGAGACTGACATCGGAAACCATGAAGCCTCCCAACTTCTTCCAACCAATCCTTATTCCGCCACGAAAGCAGGCGCCGAGATGTTGGTAATGGCTTATCATAGATCTTACAATCTTTCCACAATAACTACTAGAGGAAACAATGTGTACGGTCCCAACCAATATCCTGAGAAGCTTGTCCCTAAATTCGTCCTTAGGGCGATGAAGGGACAAAAGCTTCCCATCCACGGCGACGGATCCAATGTTAGGAGCTACCTTTATTGCGGCGATGTAGCCGAAGCGTTCGATGTTATTCTCCACAAAGGAATGATTGGCCAAGTCTATAACATTGGCACCAAGAAAGAGAGAAGTGTATTAGATGTGGCAGAGCATATTTGCAAGCTTTTCAACATAAATTCAAAGGATGTTATTGAATTTGTTCAAGATAGGCCATTTAATGATAAGAGATATTTCCTAGATGATCAAAAGCTCAAGAATCTAGGATGGGAGGAAAGAACTCCTTGGGAAGAAGGATTAAAGTTGACAATTGATTGGTACAAAAAGAATCCAGATTGGTGGGGAGACGTGTCGAATGCCCTGAATCCGCATCCGCGCTTCTCAGCCACCAATCTGGCTGATGAAGCACAATGGTCGTTTCAATGCGGATACTCAAGGCTAGGAAGGTCATTTACTGAAGTAGGACGAAATAAAACGTTTGTGAAATTTTTGATATATGGGAAGACGGGTTGGATTGGAGGGTTGCTAGGGAAGCTTTGTGATGAAGAAAGAATCCAATGGGAGTATGGAAAGGGAAGATTAGAAGATAAAAAGTCATTAATGGAGGATATAAGTAGGGTAAAGCCAACACATGTGTTGAATGCAGCTGGGGTAACTGGAAGGCCAAATGTTGATTGGTGTGAATCACATAAAGTTGAGACAATAAGGACTAATGTTGTTGGGACATTAAATTTGGCTGATGTTTGCATTGGCTTCAAGGAGGAGGACAAGCCAAATTTCATTGGTTCCTTCTATTCCAAGACTAAGGCCATGGTGGAGGATCTGTTGAAAAATTACGAGAACGTTTGCACATTGAGAGTTAGAATGCCAATATCATCAGATCTTAGCAATCCTAGAAATTTCATTACCAAGATTTCTCGTTACAACAAGGTGGTAGATATACCTAACAGCATGACCGTGCTAGATGAGTTGTTACCTATATCCATTGAGATGGCTAAGAGGAACTTAAAAGGGATTTGGAACTTCACCAATCCTGGGGTCATAAGCCACAATCAAATATTAGAATTGTACAGGGACTATATTGATCCAAATTTCAAGTGGCAAAATTTTAATTTGGAAGAACAAGCAAAGGTAATTGTTGCTCCCAGGAGTAACAATGAAATGGATGCCTCCAAGCTCAAGAAAGAGTTCCCAGACATGCTCAACATCAGAGATTCCATTATCAAGTATGTCTTTGAGCCCAACAAGAAAACTTAA 1905 0.4084 MSKQASSYVPKNILITGAAGFIASHVTTRLINKYPSYKIVALDKLDYCSNIKNLQCCTSSPNFKFIKGDIASSDMVNHLLIEEEIDTIMHFAAQTHVDNSFGNSMEFTYNNIYGTHVLLEACRVTNCIKRFIHVSTDEVYGETDSETDIGNHEASQLLPTNPYSATKAGAEMLVMAYHRSYNLSTITTRGNNVYGPNQYPEKLVPKFVLRAMKGQKLPIHGDGSNVRSYLYCGDVAEAFDVILHKGMIGQVYNIGTKKERSVLDVAEHICKLFNINSKDVIEFVQDRPFNDKRYFLDDQKLKNLGWEERTPWEEGLKLTIDWYKKNPDWWGDVSNALNPHPRFSATNLADEAQWSFQCGYSRLGRSFTEVGRNKTFVKFLIYGKTGWIGGLLGKLCDEERIQWEYGKGRLEDKKSLMEDISRVKPTHVLNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCIGFKEEDKPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVISHNQILELYRDYIDPNFKWQNFNLEEQAKVIVAPRSNNEMDASKLKKEFPDMLNIRDSIIKYVFEPNKKT 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02725 634 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 378 625 IPR036291 -
Adu06g02725 634 CDD dTDP_GD_SDR_e 11 328 IPR005888 GO:0008460|GO:0009225
Adu06g02725 634 Gene3D - 370 634 - -
Adu06g02725 634 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 465 - -
Adu06g02725 634 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 336 IPR036291 -
Adu06g02725 634 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM3-LIKE 1 465 - -
Adu06g02725 634 Gene3D - 204 326 - -
Adu06g02725 634 Pfam Polysaccharide biosynthesis protein 408 467 IPR003869 -
Adu06g02725 634 Pfam GDP-mannose 4,6 dehydratase 14 317 IPR016040 -
Adu06g02725 634 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM3-LIKE 466 632 - -
Adu06g02725 634 Gene3D - 13 317 - -
Adu06g02725 634 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 466 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02725 Adu-Chr6 103872559 103875725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02725 12 323 Miscellaneous Gene Families AT1G02000 25.444 1.19e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02725 K12450 - gmx:100776241 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02725 06 103872559 103875725 Adu06g02725 06 103872559 103875725 ECH