Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02642 ATGGACTCCCAAATCCAGAAGCCTTTCAAAGTATACCTAGTTTCCTCCCCCGAGTCGCCCGAGTTCACCCTCCTCACTCGGTCCCTGACTCAGTCCTCGCTCGTCGGGCTCGACGCCGAGTGGAAGCCTGTCCGAACATACCAGTCTTCGTTCCCCGACGTGTCGCTGCTCCAAATCGCCTGCCAACTCGGCGGCGACTCGGAACCTGTCTCGGCCGTGTTCCTCCTCGACCTTCTTTCCATCCCTCTCTCCTCGCTATGGAAGCCACTCCGAGAAATGCTGGAATCCCCCGAGACCTTGAAACTTGGTTTCAGATTCAAGCAAGATTTGATATATCTGTCTTCTACTTTCTGTTCCCATGGCTGCGACCCTGGTTTCGATAAGGTGGAGCCATATTTGGATATCACGAGTCTGTATAATCTTCTGTATCTAAAGAAGCATGGACGGAATGCACCGAAGCAGACTAAAAGTTTGTCGAATATATGCATGGAAGTCCTGGGTTTTCCTCTCTCAAAGGAACTCCAATGTAGTGATTGGTCATGTCGTCCTCTTACAGAAGAGCAGATAACATATGCAGCTATGGATGCTCATTGCTTGGTTGAAATATTTAACGTCTTCAATTCAAAAGTTGCCAATACAGGAGATTTTCTTCTCAAGACAACCACATTGTCTAACACAATGGAAAATGTTGGGTTGAAAGAGCTTTTTGCAAAGCATGATTTGAATGATAATGCCCTGGGAATGCAATTTTGTGAAGCCTTATCAATTGTTCGATCGACTATTGGTTCTGCTGCTGGTCAGGTGATACCTTCAGCTGAAAGAACAATTCAAAGGTTACCATGTTCGGTTAATGTACCTTCAGATGAATTTTCGAAGATTGTGAAAAAATATGGTGACAGAATTTTGTTAAAGGAGTCTGACAGAAGACCCAAAACCTCAAAAAAGAAAGCAAAAAAGCGGTCATCAACTAATGGCATTAGCAATGTAAAGCATTTGGAAAAATTTGATGACTGGCAAGGTATCCCACCTTGGGATCCATCAGTAGGAGGGGATGGATATCCAAAGTTCCTTTGTGATGTTATGGTTGAAGGCTTGGCCAAACATTTACGATGTGTTGGGATGGATGCTGCAATTCCTTATTCAAGGAAGCCTGAACAAAGGTTGGAGTTGATAGAGCAAGCCCGCAGAGAGAAGAGAGTACTTTTGACTCGAGATGCGAAGTTGCTAAGATATGAATATCTAATAAATAACCAAATATATAAAGTGAAGAGTCTTCTGAAAAATGAACAGCTACTTGAGGTCATTGAAGCCTTTCAGCTAAAAATTAGTGAGGATCAGCTGATGTCAAGATGTACAAAATGCAATGGGAGATTTATACAAAAGCCACTGTCTACTGAAGAGGCTATTGAAGCTGCAAAGGGTTTTCAGAAAATTCCAAATTTCTTATTTAACAAGAATATAGAGTTCTGGCAGTGCATGGACTGTCACCAACTTTATTGGGAGGGAACCCAATACCACAATGCAATACAGAAGTTCATTGATGTCTGCAAGCTGAGTGATTAA 1563 0.4293 MDSQIQKPFKVYLVSSPESPEFTLLTRSLTQSSLVGLDAEWKPVRTYQSSFPDVSLLQIACQLGGDSEPVSAVFLLDLLSIPLSSLWKPLREMLESPETLKLGFRFKQDLIYLSSTFCSHGCDPGFDKVEPYLDITSLYNLLYLKKHGRNAPKQTKSLSNICMEVLGFPLSKELQCSDWSCRPLTEEQITYAAMDAHCLVEIFNVFNSKVANTGDFLLKTTTLSNTMENVGLKELFAKHDLNDNALGMQFCEALSIVRSTIGSAAGQVIPSAERTIQRLPCSVNVPSDEFSKIVKKYGDRILLKESDRRPKTSKKKAKKRSSTNGISNVKHLEKFDDWQGIPPWDPSVGGDGYPKFLCDVMVEGLAKHLRCVGMDAAIPYSRKPEQRLELIEQARREKRVLLTRDAKLLRYEYLINNQIYKVKSLLKNEQLLEVIEAFQLKISEDQLMSRCTKCNGRFIQKPLSTEEAIEAAKGFQKIPNFLFNKNIEFWQCMDCHQLYWEGTQYHNAIQKFIDVCKLSD 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02642 520 Pfam Mut7-C RNAse domain 354 511 IPR002782 -
Adu06g02642 520 Gene3D - 2 242 IPR036397 GO:0003676
Adu06g02642 520 SMART 35exoneu6 11 211 IPR002562 GO:0003676|GO:0006139|GO:0008408
Adu06g02642 520 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 5 517 - -
Adu06g02642 520 MobiDBLite consensus disorder prediction 305 324 - -
Adu06g02642 520 CDD mut-7_like_exo 11 206 IPR037432 GO:0008408
Adu06g02642 520 SUPERFAMILY Ribonuclease H-like 9 214 IPR012337 -
Adu06g02642 520 Pfam 3'-5' exonuclease 22 210 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02642 Adu-Chr6 102380644 102386222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02642 K09122 - gmx:100781231 707.212