Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02415 ATGCCTCCAACATATTTCCCTCTTCGCTGGGAAAGCACAGGGGACCAATGGTGGTTCGCATCGCCAATAGACTTGGCTGCTGCTAACGGCCACTACGACTTGGTTCGCGAGCTTCTTCGAATCGATAGCAACCACCTCTTCAAGCTCACCTCGCTCCGCCGTATCCGCCGCCTCGAACTAGTATGGGACGACGACGGCGGAGACCAGTTCCATCACGTCGCCAAGTGTCGCTCTTACGTAGCCCGGAAGCTTCACGATGAGTGCGAATCGAAGAAAGGAAAGAAGAAAAATGATTCTCTGATCCGCTCCGGGTACGGCGGGTGGCTCATGTACACTGCTGCATCAGCAGGGGACTTGGAATTCGTTCGGAAGCTTCTGGAGAGGAACCGTCTGCTGGCTTTTGGAGAAGGCGAGTATGACGTCACTGATGTGTTGTATGCTGCTGCGAGGAGCAAGAATAGTGAGGTTTTCCGGCTGCTGTTTGATTTTGCGGTTACCGGAAAACAACGTGGGAATCTGGAGGAGAAGATGGTTCCGTCTGTTTATAGGTGGGAGATGACAAATAGGGGTGTTCATGCTGCTGCTAGAGGGGGTAATTTAGTCATTTTGGAGGACCTTCTTGCAAATTCTTCTGATGTTTTGGCTTATAGAGATGCTCAGGGATCTACTGTCTTGCATTCTGCTGCAGCTAGAGGCCAAGTAATCAAATATCTCACATCATCATCCTTTGAAATTATCAACTCCACAGACCATCAAGGCAACACTGCATTACATGTGGCTTCATACAGAGGCCAACTACCTTCAGTTGAAGCTCTAGTCTCTGCATCTCCATCATTAATCTCTCTTAGAAACAATTCAGGAGAAACCTTTCTCCACAAGGCCGTGTCCGGTTTCCAGTCACATGCGTTTCGAAAACTGGACCGACAGGTTGAGCTTCTAAGGGAGTTACTGAGAGGGAAGAAGTTTCACACAGATGAAATCATCAACGTTAGGAACACTGATGGAAGAACAGCTCTTCACCTTGCCACCATTGGAAACATTCGCATTGATCTTGTCCAACTCTTGATGACATCTCCATCAATCAATGTCAATGCCTGCGATGTTAATGGAATGACTCCACTTGATTACATAAAGCAAAACCCGAATTCCACAGCATCGAAAGTACTAATCCGAAAATTGATTGCAGCTGGGGGAATGTTTGGTTTTAGAGGCTATAATTCAAGAAAAGCCATAGCTTCACACTTGAAAATGCAGCAGCAGGGGAATGGAAGCAGCCCTGGTACTTCTTTCCGAATCTCGGACACTCAAATCTTTCTGTTTACAGGAATTGAGAATAATGAATGGGATGCTAGTTCTGATGAGGGAAGCGCGACGGCGATGAGCGCTTTGCCTTCATCAGAACACATAGCATACGACTCTGCAGCTTTAGAGCACAGAAGATCAACCACTAGCAAGAGGCTGAGTTCCATGAACTACGCTGCCGCTGCTCGGTTGAGAAGAGTCTTTCATTGTCATAAGGGGAAGAAGGACAAGAGAAATGAAGGATTCAAGAAATCATTTGACGACAAGGTTTCCAAAGAAATCCCGAAACCACTTAGGCATAAATATTTTAGGCCTTCAATGGTTGTAAACAATAAAAGGAACTTTTCTGTGAGGAGTTACCAGTCAAGTCCGAATGCAAAGAAGAGATTTGCTTCAGGAACTGCGCACGGCGATGCGCAATCCATGCCACATGTAAAGGTTTCAGGGAGGTCAAGGTCTAGTTCATTTTCCATGATGTCATCATCAGTTTCTTCACCAAGATCGATGGATAAGCAGAAGGATATTTGCATTATTGACAATAATGATGGAGCTTCTTGCTCAAGTGAAATGAACAACGATGGTGATGAATCAGAAATTTTGGGAAAGAGAGCTTCTTCAGTTAGTAGAAAAATGAGGAGTCATGGTTATTTGTGTTTTGGTGAGCGGAGACTTCTTAATGCGAGAACAACCTTGAAGCGTAAACAAGAAAGCAAGAGCGGGGTTTAG 2028 0.4571 MPPTYFPLRWESTGDQWWFASPIDLAAANGHYDLVRELLRIDSNHLFKLTSLRRIRRLELVWDDDGGDQFHHVAKCRSYVARKLHDECESKKGKKKNDSLIRSGYGGWLMYTAASAGDLEFVRKLLERNRLLAFGEGEYDVTDVLYAAARSKNSEVFRLLFDFAVTGKQRGNLEEKMVPSVYRWEMTNRGVHAAARGGNLVILEDLLANSSDVLAYRDAQGSTVLHSAAARGQVIKYLTSSSFEIINSTDHQGNTALHVASYRGQLPSVEALVSASPSLISLRNNSGETFLHKAVSGFQSHAFRKLDRQVELLRELLRGKKFHTDEIINVRNTDGRTALHLATIGNIRIDLVQLLMTSPSINVNACDVNGMTPLDYIKQNPNSTASKVLIRKLIAAGGMFGFRGYNSRKAIASHLKMQQQGNGSSPGTSFRISDTQIFLFTGIENNEWDASSDEGSATAMSALPSSEHIAYDSAALEHRRSTTSKRLSSMNYAAAARLRRVFHCHKGKKDKRNEGFKKSFDDKVSKEIPKPLRHKYFRPSMVVNNKRNFSVRSYQSSPNAKKRFASGTAHGDAQSMPHVKVSGRSRSSSFSMMSSSVSSPRSMDKQKDICIIDNNDGASCSSEMNNDGDESEILGKRASSVSRKMRSHGYLCFGERRLLNARTTLKRKQESKSGV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02415 675 Pfam Ankyrin repeat 334 367 IPR002110 GO:0005515
Adu06g02415 675 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 629 - -
Adu06g02415 675 SUPERFAMILY Ankyrin repeat 22 391 IPR036770 -
Adu06g02415 675 SMART ANK_2a 105 134 IPR002110 GO:0005515
Adu06g02415 675 SMART ANK_2a 186 215 IPR002110 GO:0005515
Adu06g02415 675 SMART ANK_2a 252 282 IPR002110 GO:0005515
Adu06g02415 675 SMART ANK_2a 334 365 IPR002110 GO:0005515
Adu06g02415 675 SMART ANK_2a 286 325 IPR002110 GO:0005515
Adu06g02415 675 SMART ANK_2a 18 47 IPR002110 GO:0005515
Adu06g02415 675 SMART ANK_2a 220 248 IPR002110 GO:0005515
Adu06g02415 675 Gene3D - 240 396 IPR036770 -
Adu06g02415 675 MobiDBLite consensus disorder prediction 553 604 - -
Adu06g02415 675 ProSiteProfiles Ankyrin repeat region circular profile. 252 274 - -
Adu06g02415 675 Gene3D - 185 239 IPR036770 -
Adu06g02415 675 MobiDBLite consensus disorder prediction 580 603 - -
Adu06g02415 675 Pfam Ankyrin repeats (3 copies) 192 274 IPR002110 GO:0005515
Adu06g02415 675 ProSiteProfiles Ankyrin repeat profile. 252 284 IPR002110 GO:0005515
Adu06g02415 675 Gene3D - 13 179 IPR036770 -
Adu06g02415 675 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02415 Adu-Chr6 97989701 97992894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02415 192 411 Miscellaneous Gene Families AT5G60070 31.878 8.38e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02415 - - gmx:100805213 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02415 06 97989701 97992894 Adu06g02415 06 97989701 97992894 ECH