Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02400 ATGTCATACTCAAGGTTCCTCAGCTCAAGTAAAGGCCCTTTGTGGGTTGCAGCTTACTGTTTCAAGCACCTCAAGAAAGCTCAAATCCTTCAGACTCACATTCCTTCCTCTGTTGACAAGATTTTGCAGGATGAAATGAATGCTATCTCCTATAGAGTGCTTGCCTATCTTCTTCTTGGTGTTGTCAGAATATATTCAAAGAAGGCTGAATATTTGTTAGATGATTGCAATGGGATGCTTGTTAGAATCAATAAGTTCGTGATCAAAACAAAAGACAAAGCACCCATGGAAACAATGCGGATAGGCCATATTGCTTCACAAGAGGAAATTACTCTTAAAGATGTTGTGTGTAGCAATGAGGGATTTGGGCTGTTTTCTCTAGACAAGTTTGAGAAGTTTGATCTTTGTCAAAATATCTGCATTGATGATCATGCTATGTTGGAAGATTTTTGTGAATCACATGAGATGGACGTGGAATATGAATTTTTGCTGCCAAATAGTCCTACTAATTTAATGGAGGACAAGAATATATCTGAAACGAGCATAGTCCATGTGGCTGCATCATGCGAGGACAAATTACCTGAAGAAAGAAGTAGAATATCTAGAGATGAATGGGTGGATGCCAGTATATTTTCTGGGAGAGTAAAGGAACCTGCGCTATCTGTTGAAGCACTTAATGAATCTCATCAAGTTGATGAAGAACAAAGTATGGTTCTGGAGACATCAAGCTCATTGTGCCAAATGCATAAAGAAAGTACTGAAGTTCATGAAATAAGAAATTTTCAAGAAAATACAAAAATGCCCCAAGAAGATAAATCCCATCAGATAGATTTTTGCATGGACCACAGTAAATCTTCTGTTGCGGAGAAAAACCTTGAAGAAAACACTAAAAGATCTGTTGAAGAGCATGAGAAAGAGAGCAAATTTATGTGTCAAGTAAAGGTTTTACTTGAATGTGAAAAGCTTAAGGTTATTTCAGCGGAGTCAAAAAATCTTGATGCAACACCTCAGTCTAAGCTTCAAGGTAGTTCAGTTAGAAAACAAAAACAAGGAGCTACTTCACCAGAGTTTATGCATATTTCGACACCGGCTTTAAGGGAGCGTGCATCCTTTTCAAGGAAAAGAAAAATTGTTATTGATGGAATGATAGTGGTGCCTAATGAGGTACTTAAAAAAAGTCTCTATGATACAAGTGACTTAATTGCTAACCGCAGAAAATTCCGCCGTACTTTATTGTCTGTGCAGAGAGAATCTCGCATATCCAATCTTTGTGATGGATTCCACAGACCTCTATTTCCTTGTTCTTCCTTAGATCTTTGCTCCTTATTCTCTAAAAGCAAAATATCAAGTTCCCTCAAAATTGTGGAAAATCAAGAGAACTTAGATGTATCAAACTCTCAAACTGTTGGAGATCCAGTGCATACAGCAATAGCTCCACAAACCCCTTGTCAGCGCCCAGTTCCCCTTCAAATTTTGGAAATTCCAGCGAGGTTAGATGTCTCAGAAAATATTGGCAGTCCAGAGCAGATAGAAACTGCACCGAGAACGCCTCCTCAGTTCCAAAAGACAAAACTTAGACCAATTGAGCAACTGGAGAGAAATGAAATTCAACACACTGATAATTTAGAACCTTCAATTCCACATGGAACTAGAGATAGAGAGCAACCTTTGAGAAGGGACGATGAACTCAATCTGATGGAAGAGGTGATAAATTCATGTGAAACGGAGAATTCAAACTTGTTAGCTGGGTGGTCTGATCGAACCAGGAGAGTTGCGAGGTACTTGCACCGGAGTTATCTGGGCCTAAGGAAACAGACACACGAGCAAGTTGTGAATTTTTCACAAGTTTTGGAAGGACGCGTGAGGAAAGAATGCGCAAGGCTCTTTTATGAATTACTGGTTTTGAGGACTACAAGTTATGTGGGTGTCGAGCAAAATAGTGCTTATGGTGACATACTAATGGTTAAACTCCAAAAATTGGATCAAGCTTTTGGACTTATTGACTTGTAA 2010 0.3891 MSYSRFLSSSKGPLWVAAYCFKHLKKAQILQTHIPSSVDKILQDEMNAISYRVLAYLLLGVVRIYSKKAEYLLDDCNGMLVRINKFVIKTKDKAPMETMRIGHIASQEEITLKDVVCSNEGFGLFSLDKFEKFDLCQNICIDDHAMLEDFCESHEMDVEYEFLLPNSPTNLMEDKNISETSIVHVAASCEDKLPEERSRISRDEWVDASIFSGRVKEPALSVEALNESHQVDEEQSMVLETSSSLCQMHKESTEVHEIRNFQENTKMPQEDKSHQIDFCMDHSKSSVAEKNLEENTKRSVEEHEKESKFMCQVKVLLECEKLKVISAESKNLDATPQSKLQGSSVRKQKQGATSPEFMHISTPALRERASFSRKRKIVIDGMIVVPNEVLKKSLYDTSDLIANRRKFRRTLLSVQRESRISNLCDGFHRPLFPCSSLDLCSLFSKSKISSSLKIVENQENLDVSNSQTVGDPVHTAIAPQTPCQRPVPLQILEIPARLDVSENIGSPEQIETAPRTPPQFQKTKLRPIEQLERNEIQHTDNLEPSIPHGTRDREQPLRRDDELNLMEEVINSCETENSNLLAGWSDRTRRVARYLHRSYLGLRKQTHEQVVNFSQVLEGRVRKECARLFYELLVLRTTSYVGVEQNSAYGDILMVKLQKLDQAFGLIDL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02400 669 Gene3D Structural maintenance of chromosome 1. Chain E 586 664 IPR023093 -
Adu06g02400 669 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 664 IPR039781 GO:0007062|GO:0008278
Adu06g02400 669 MobiDBLite consensus disorder prediction 335 355 - -
Adu06g02400 669 Pfam Conserved region of Rad21 / Rec8 like protein 607 653 IPR006909 -
Adu06g02400 669 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 664 - -
Adu06g02400 669 SUPERFAMILY "Winged helix" DNA-binding domain 587 657 IPR036390 -
Adu06g02400 669 Pfam N terminus of Rad21 / Rec8 like protein 1 91 IPR006910 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02400 Adu-Chr6 97687736 97697483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02400 K06670 - qsu:112016663 382.489